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X-Ray structure of r[CGCG(5-fluoro)CG]2
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.6 293 2.0M lithium sulfate, 10mM magnesium chloride and 50mM MES, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 1.89 34.86
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 21.224 α = 97.56 b = 26.486 β = 105.47 c = 29.31 γ = 109.38
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MAR scanner 345 mm plate Si(111) 2001-11-17 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE BW7A 1.1000 EMBL/DESY, HAMBURG BW7A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.45 20 93.7 0.041 30 3.1 9439 9439 14
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.45 1.47 80 0.296 2.6 2.2 409
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.45 15 9199 174 100 0.17181 0.17181 0.17115 0.1744 0.20517 0.212 RANDOM 20.307
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.25 -0.41 -0.32 -0.47 -0.74 0.09
RMS Deviations Key Refinement Restraint Deviation r_scangle_it 3.098 r_scbond_it 2.479 r_angle_refined_deg 2.022 r_nbtor_refined 0.276 r_nbd_refined 0.176 r_metal_ion_refined 0.169 r_symmetry_vdw_refined 0.148 r_symmetry_hbond_refined 0.13 r_xyhbond_nbd_refined 0.113 r_chiral_restr 0.078
RMS Deviations Key Refinement Restraint Deviation r_scangle_it 3.098 r_scbond_it 2.479 r_angle_refined_deg 2.022 r_nbtor_refined 0.276 r_nbd_refined 0.176 r_metal_ion_refined 0.169 r_symmetry_vdw_refined 0.148 r_symmetry_hbond_refined 0.13 r_xyhbond_nbd_refined 0.113 r_chiral_restr 0.078 r_bond_refined_d 0.011 r_gen_planes_refined 0.011
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms Nucleic Acid Atoms 508 Solvent Atoms 132 Heterogen Atoms 4
Software Software Software Name Purpose MAR345dtb data collection MOLREP phasing REFMAC refinement DENZO data reduction SCALEPACK data scaling