X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP728115% PEG 5000 MME, 100 mM Hepes pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 281K
Crystal Properties
Matthews coefficientSolvent content
3.4864.61

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 84.041α = 90
b = 93.186β = 119.5
c = 84.412γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray77CCDMARMOSAIC 300 mm CCD2007-12-01MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 22-ID1.0APS22-ID

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.55032991

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT2.5139.2832068134985.950.247030.245490.28435RANDOM43.637
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.461.52-0.11.13
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.991
r_dihedral_angle_3_deg20.309
r_dihedral_angle_4_deg19.741
r_dihedral_angle_1_deg4.549
r_scangle_it2.465
r_scbond_it1.436
r_angle_refined_deg1.115
r_mcangle_it1.045
r_mcbond_it0.699
r_nbtor_refined0.301
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.991
r_dihedral_angle_3_deg20.309
r_dihedral_angle_4_deg19.741
r_dihedral_angle_1_deg4.549
r_scangle_it2.465
r_scbond_it1.436
r_angle_refined_deg1.115
r_mcangle_it1.045
r_mcbond_it0.699
r_nbtor_refined0.301
r_nbd_refined0.213
r_symmetry_vdw_refined0.204
r_xyhbond_nbd_refined0.15
r_symmetry_hbond_refined0.109
r_chiral_restr0.09
r_bond_refined_d0.009
r_gen_planes_refined0.003
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms5762
Nucleic Acid Atoms
Solvent Atoms116
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
SOLVEphasing
CNSrefinement
HKL-2000data collection
HKL-2000data reduction
HKL-2000data scaling