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BHA10 IgG1 wild-type Fab - antibody directed at human LTBR
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 8 277 22% PEG 4000, 100 mM calcium acetate and 100 mM Tris at pH 8, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.58 52.33
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 139.157 α = 90 b = 46.193 β = 96.48 c = 150.628 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2008-02-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X29A NSLS X29A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 50 96.2 0.064 76203 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.9 1.97 88.9 0.373
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.9 40 2 76203 69586 3683 96.2 0.182 0.18 0.206 0.2052 RANDOM 17.96
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.34 -0.17 -0.76 0.38
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.062 r_dihedral_angle_4_deg 17.874 r_dihedral_angle_3_deg 13.861 r_dihedral_angle_1_deg 7.971 r_scangle_it 3.335 r_scbond_it 2.386 r_angle_refined_deg 1.448 r_mcangle_it 1.404 r_mcbond_it 1.401 r_angle_other_deg 0.863
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.062 r_dihedral_angle_4_deg 17.874 r_dihedral_angle_3_deg 13.861 r_dihedral_angle_1_deg 7.971 r_scangle_it 3.335 r_scbond_it 2.386 r_angle_refined_deg 1.448 r_mcangle_it 1.404 r_mcbond_it 1.401 r_angle_other_deg 0.863 r_symmetry_vdw_other 0.307 r_symmetry_vdw_refined 0.233 r_nbd_refined 0.21 r_nbd_other 0.209 r_mcbond_other 0.182 r_nbtor_refined 0.177 r_xyhbond_nbd_refined 0.141 r_symmetry_hbond_refined 0.123 r_nbtor_other 0.087 r_chiral_restr 0.085 r_bond_refined_d 0.013 r_bond_other_d 0.007 r_gen_planes_refined 0.006 r_gen_planes_other 0.002 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6474 Nucleic Acid Atoms Solvent Atoms 408 Heterogen Atoms 8
Software Software Software Name Purpose HKL-2000 data collection MOLREP phasing REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling