Experiment: 3GUY

X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION	5.4	294	100mM Bis-Tris pH 5.4, 15% PEG 3350, 100mM magnesium chloride, vapor diffusion, temperature 294K

Crystal Properties
Matthews coefficient	Solvent content
2.09	41.04

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 68.814	α = 72.38
b = 71.315	β = 89.39
c = 93.075	γ = 74.3

Symmetry
Space Group	P 1

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	CCD	MAR CCD 165 mm		2009-02-03	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	APS BEAMLINE 31-ID	0.97958	APS	31-ID

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	R Sym I (Observed)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	1.9	88.44	96.9	0.089	0.089	7.3	2.4	127600	123644			23.7

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	R-Sym I (Observed)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	1.9	2	95.5		0.324	0.324	2.1	2.4	17750

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (All)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (Observed)	R-Work (Depositor)	R-Work (DCC)	R-Free (Depositor)	R-Free (DCC)	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	SAD	THROUGHOUT	1.9	20	127464	123564	6218	96.94	0.202	0.2	0.21	0.249	0.25	RANDOM	32.568

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-0.7	0.55	0.7	0.04	-0.35	0.56

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	39.004
r_dihedral_angle_3_deg	15.865
r_dihedral_angle_4_deg	13.156
r_dihedral_angle_1_deg	5.96
r_scangle_it	4.311
r_scbond_it	2.666
r_mcangle_it	1.677
r_angle_refined_deg	1.557
r_angle_other_deg	0.961
r_mcbond_it	0.934

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	39.004
r_dihedral_angle_3_deg	15.865
r_dihedral_angle_4_deg	13.156
r_dihedral_angle_1_deg	5.96
r_scangle_it	4.311
r_scbond_it	2.666
r_mcangle_it	1.677
r_angle_refined_deg	1.557
r_angle_other_deg	0.961
r_mcbond_it	0.934
r_mcbond_other	0.236
r_chiral_restr	0.094
r_bond_refined_d	0.017
r_gen_planes_refined	0.006
r_bond_other_d	0.001
r_gen_planes_other	0.001

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	12733
Nucleic Acid Atoms
Solvent Atoms	586
Heterogen Atoms

Software

Software
Software Name	Purpose
SCALA	data scaling
REFMAC	refinement
PDB_EXTRACT	data extraction
MAR345	data collection
MOSFLM	data reduction
SHELXCD	phasing
SHELXE	model building

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.