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Crystal structure of dicamba monooxygenase bound to 3,6 dichlorosalicylic acid (DCSA)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5 298 5% PEG 4000, 100 mM sodium acetate, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.6 52.76
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 81.205 α = 90 b = 81.205 β = 90 c = 158.557 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 Bent Rh coated conical Si mirror 2007-03-12 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 14-BM-C 0.9 APS 14-BM-C
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.75 70 99.5 0.066 27.8 7.3 118165 117603
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.75 1.81 99.8 0.81 1.6 4 11814
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.75 42.25 118165 117603 5898 99.5 0.16972 0.1678 0.1729 0.20619 0.2143 RANDOM 26.16
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.26 0.13 0.26 -0.39
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.926 r_dihedral_angle_4_deg 17.881 r_dihedral_angle_3_deg 13.693 r_dihedral_angle_1_deg 10.189 r_scangle_it 6.695 r_scbond_it 5.335 r_mcangle_it 3.493 r_mcbond_it 3.239 r_angle_refined_deg 1.28 r_mcbond_other 1.119
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.926 r_dihedral_angle_4_deg 17.881 r_dihedral_angle_3_deg 13.693 r_dihedral_angle_1_deg 10.189 r_scangle_it 6.695 r_scbond_it 5.335 r_mcangle_it 3.493 r_mcbond_it 3.239 r_angle_refined_deg 1.28 r_mcbond_other 1.119 r_angle_other_deg 0.735 r_symmetry_hbond_refined 0.437 r_symmetry_vdw_other 0.328 r_symmetry_vdw_refined 0.281 r_nbd_other 0.242 r_nbd_refined 0.227 r_xyhbond_nbd_refined 0.208 r_nbtor_refined 0.187 r_chiral_restr 0.09 r_nbtor_other 0.09 r_bond_refined_d 0.011 r_gen_planes_refined 0.01 r_bond_other_d r_gen_planes_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7672 Nucleic Acid Atoms Solvent Atoms 924 Heterogen Atoms 82
Software Software Software Name Purpose ADSC data collection SHELXDE phasing REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling