X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1vapor diffusion, sitting drops6.829811% PEG 8000, 9% DMSO, 0.02M SODIUM CACODYLATE, 0.02M MAGNESIUM CHLORIDE, 0.15M POTASSIUM CHLORIDE, pH 6.8, vapor diffusion, sitting drops, temperature 298K
Crystal Properties
Matthews coefficientSolvent content
2.4549.83

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 48.389α = 90
b = 232.671β = 92.21
c = 106.576γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 3152007-10-05MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONNSLS BEAMLINE X29A1.1NSLSX29A

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1328.2397.60.129.8634.146457
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
133.1194.644492

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT328.2345861233397.730.2530.250.318RANDOM61.196
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.99-1.67-0.52-0.6
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg27.584
r_dihedral_angle_3_deg15.964
r_dihedral_angle_4_deg15.37
r_dihedral_angle_1_deg4.458
r_angle_other_deg1.696
r_scangle_it0.91
r_angle_refined_deg0.892
r_scbond_it0.503
r_mcangle_it0.333
r_mcbond_it0.179
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg27.584
r_dihedral_angle_3_deg15.964
r_dihedral_angle_4_deg15.37
r_dihedral_angle_1_deg4.458
r_angle_other_deg1.696
r_scangle_it0.91
r_angle_refined_deg0.892
r_scbond_it0.503
r_mcangle_it0.333
r_mcbond_it0.179
r_chiral_restr0.041
r_mcbond_other0.016
r_bond_refined_d0.003
r_gen_planes_refined0.002
r_bond_other_d
r_gen_planes_other
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2854
Nucleic Acid Atoms13172
Solvent Atoms82
Heterogen Atoms74

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
MOLREPphasing
REFMACrefinement
PDB_EXTRACTdata extraction