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N-Benzyl-indolo carboxylic acids: Design and synthesis of potent and selective adipocyte Fatty-Acid Binding Protein (A-FABP) inhibitors
Crystallization Crystal Properties Matthews coefficient Solvent content 2.1 41.51
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 71.715 α = 90 b = 53.384 β = 90 c = 32.097 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE RIGAKU RAXIS IV M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 25 98.3 6536
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.2 15 6211 298 97.95 0.224 0.22165 0.2274 0.27414 0.2851 RANDOM 27.957
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.37 -1.44 1.07
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 18.408 r_scangle_it 4.779 r_dihedral_angle_1_deg 4.365 r_scbond_it 3.076 r_angle_refined_deg 1.954 r_mcangle_it 1.754 r_mcbond_it 0.944 r_symmetry_vdw_refined 0.375 r_symmetry_hbond_refined 0.319 r_nbd_refined 0.241
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 18.408 r_scangle_it 4.779 r_dihedral_angle_1_deg 4.365 r_scbond_it 3.076 r_angle_refined_deg 1.954 r_mcangle_it 1.754 r_mcbond_it 0.944 r_symmetry_vdw_refined 0.375 r_symmetry_hbond_refined 0.319 r_nbd_refined 0.241 r_xyhbond_nbd_refined 0.219 r_chiral_restr 0.119 r_bond_refined_d 0.019 r_gen_planes_refined 0.007 r_bond_other_d r_angle_other_deg r_dihedral_angle_2_deg r_dihedral_angle_4_deg r_gen_planes_other r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1021 Nucleic Acid Atoms Solvent Atoms 115 Heterogen Atoms 27
Software Software Software Name Purpose HKL-2000 data collection AMoRE phasing REFMAC refinement DENZO data reduction SCALEPACK data scaling