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Human c-Met Kinase in complex with quinoxaline inhibitor
Crystallization Crystal Properties Matthews coefficient Solvent content 2.36 47.83
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 47.377 α = 100.7 b = 47.587 β = 103.62 c = 75.6 γ = 98.29
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL PSI PILATUS 6M 2007-11-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X06SA 1.00 SLS X06SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.4 24.56 88.5 0.051 0.036 10.59 107820
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.4 1.47 67 0.516 0.365 2.01 10482
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT 1.4 20 104583 3235 0.16816 0.1769 0.22491 0.2309 RANDOM 24.32
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.266 r_dihedral_angle_4_deg 17.446 r_dihedral_angle_3_deg 14.409 r_scangle_it 10.096 r_scbond_it 8.125 r_mcangle_it 6.142 r_dihedral_angle_1_deg 5.981 r_mcbond_it 4.888 r_mcbond_other 3.064 r_angle_refined_deg 1.682
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.266 r_dihedral_angle_4_deg 17.446 r_dihedral_angle_3_deg 14.409 r_scangle_it 10.096 r_scbond_it 8.125 r_mcangle_it 6.142 r_dihedral_angle_1_deg 5.981 r_mcbond_it 4.888 r_mcbond_other 3.064 r_angle_refined_deg 1.682 r_angle_other_deg 1.267 r_xyhbond_nbd_other 0.346 r_symmetry_vdw_other 0.313 r_metal_ion_refined 0.229 r_nbd_refined 0.22 r_nbd_other 0.205 r_symmetry_hbond_refined 0.193 r_nbtor_refined 0.187 r_symmetry_vdw_refined 0.187 r_xyhbond_nbd_refined 0.179 r_chiral_restr 0.098 r_nbtor_other 0.083 r_bond_refined_d 0.018 r_gen_planes_refined 0.008 r_gen_planes_other 0.003 r_bond_other_d 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4620 Nucleic Acid Atoms Solvent Atoms 453 Heterogen Atoms 87
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling