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Crystal structure of TIPE2
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.6 291 13% PEGMME2000, 0.23M Sodium Citrate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Crystal Properties Matthews coefficient Solvent content 2.28 46.09
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 91.815 α = 90 b = 91.815 β = 90 c = 67.952 γ = 120
Symmetry Space Group P 62 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210 2008-05-28 M SINGLE WAVELENGTH 2 1 x-ray 100 CCD ADSC QUANTUM 210 2008-05-28 M SINGLE WAVELENGTH 3 1 x-ray 100 CCD Bruker Platinum 135 2008-02-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SPRING-8 BEAMLINE BL41XU 1.5 SPring-8 BL41XU 2 SYNCHROTRON SPRING-8 BEAMLINE BL41XU 1 SPring-8 BL41XU 3 ROTATING ANODE BRUKER AXS MICROSTAR-H 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2,3 1.696 30 98.8 0.056 6.6 19263 19032 2 2 28.02
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.696 1.76 99.9 0.661 3.2 6.5 1872
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD 1.696 25.829 1.33 18952 972 98.51 0.1901 0.1874 0.1838 0.2432 0.2362 RANDOM 35.154
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.202 -0.202 0.403
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 12.949 f_angle_d 0.726 f_chiral_restr 0.047 f_bond_d 0.004 f_plane_restr 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1228 Nucleic Acid Atoms Solvent Atoms 99 Heterogen Atoms 1
Software Software Software Name Purpose HKL-2000 data collection SHELXS phasing PHENIX refinement HKL-2000 data reduction HKL-2000 data scaling