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Structure of a cubic crystal form of X (ADRP) domain from FCoV
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7 292 ammonium citrate, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 292K
Crystal Properties Matthews coefficient Solvent content 5.926919 79.247231
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 218.99 α = 90 b = 218.99 β = 90 c = 218.99 γ = 90
Symmetry Space Group P 21 3
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2008-03-13 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-2 0.933 ESRF ID14-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 50 99.8 0.154 20.33 21.5 176415 176075 -3 31.389
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.2 2.33 98.9 0.607 5.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.2 24.8 175890 175890 8797 99.99 0.149 0.147 0.181 0.1766 RANDOM 39.885
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.243 r_dihedral_angle_4_deg 21.382 r_dihedral_angle_3_deg 15.095 r_dihedral_angle_1_deg 6.377 r_scangle_it 4.678 r_scbond_it 2.814 r_mcangle_it 1.661 r_angle_refined_deg 1.624 r_mcbond_it 0.906 r_chiral_restr 0.112
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.243 r_dihedral_angle_4_deg 21.382 r_dihedral_angle_3_deg 15.095 r_dihedral_angle_1_deg 6.377 r_scangle_it 4.678 r_scbond_it 2.814 r_mcangle_it 1.661 r_angle_refined_deg 1.624 r_mcbond_it 0.906 r_chiral_restr 0.112 r_bond_refined_d 0.02 r_gen_planes_refined 0.008
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 10668 Nucleic Acid Atoms Solvent Atoms 2343 Heterogen Atoms
Software Software Software Name Purpose XSCALE data scaling PHASER phasing REFMAC refinement PDB_EXTRACT data extraction XDS data scaling XDS data reduction SCALA data scaling