☰ Navigation Tabs
Crystal structure of the Bacillus anthracis phenazine biosynthesis protein, PhzF family
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 7 293 2M NH4SO4, 5% isopropanol, pH 7.0, VAPOR DIFFUSION, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.19 43.95
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 60.089 α = 90 b = 65.638 β = 90 c = 150.17 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 105 CCD MARMOSAIC 300 mm CCD 2008-08-07 M SINGLE WAVELENGTH 2 1 x-ray CCD MARMOSAIC 300 mm CCD 2008-08-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 21-ID-G 0.97856 APS 21-ID-G 2 SYNCHROTRON APS BEAMLINE 21-ID-D 0.97625 APS 21-ID-D
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 1.5 38.18 97.8 0.087 13 5 95606 93368 1.6 2.4 18.2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.5 1.55 89.6 0.445 2.4 3.6 8426
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.5 38.18 95606 93368 4709 97.66 0.182 0.182 0.18 0.1821 0.219 RANDOM 18.204
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.465 r_dihedral_angle_4_deg 18.864 r_dihedral_angle_3_deg 12.574 r_dihedral_angle_1_deg 6.015 r_scangle_it 1.747 r_mcangle_it 1.587 r_scbond_it 1.242 r_angle_refined_deg 1.195 r_mcbond_it 1.094 r_nbtor_refined 0.318
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.465 r_dihedral_angle_4_deg 18.864 r_dihedral_angle_3_deg 12.574 r_dihedral_angle_1_deg 6.015 r_scangle_it 1.747 r_mcangle_it 1.587 r_scbond_it 1.242 r_angle_refined_deg 1.195 r_mcbond_it 1.094 r_nbtor_refined 0.318 r_nbd_refined 0.217 r_symmetry_vdw_refined 0.205 r_symmetry_hbond_refined 0.179 r_xyhbond_nbd_refined 0.161 r_chiral_restr 0.083 r_bond_refined_d 0.009 r_gen_planes_refined 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4856 Nucleic Acid Atoms Solvent Atoms 885 Heterogen Atoms 84
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction BLU-MAX data collection HKL-2000 data reduction HKL-2000 data scaling SHARP phasing