X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP7293100mM calcium chloride, 100mM Hepes, PEG 2000 MME, pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
2.1643

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 79.405α = 90
b = 64.71β = 105.29
c = 148.355γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 42006-06-09MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE BM14ESRFBM14

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
13.2142.861990018436

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT3.2142.861843618436100279.750.260860.257740.3176RANDOM79.576
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.79-5.16.13-7.03
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.486
r_dihedral_angle_3_deg25.627
r_dihedral_angle_4_deg19.213
r_dihedral_angle_1_deg9.799
r_angle_refined_deg2.302
r_scangle_it2.183
r_scbond_it1.393
r_mcangle_it0.85
r_mcbond_it0.491
r_symmetry_vdw_refined0.407
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.486
r_dihedral_angle_3_deg25.627
r_dihedral_angle_4_deg19.213
r_dihedral_angle_1_deg9.799
r_angle_refined_deg2.302
r_scangle_it2.183
r_scbond_it1.393
r_mcangle_it0.85
r_mcbond_it0.491
r_symmetry_vdw_refined0.407
r_nbtor_refined0.343
r_nbd_refined0.324
r_symmetry_hbond_refined0.308
r_xyhbond_nbd_refined0.255
r_chiral_restr0.139
r_bond_refined_d0.022
r_gen_planes_refined0.008
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms9641
Nucleic Acid Atoms
Solvent Atoms
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement