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Structure of thaumatin with the magic triangle I3C
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6.8 293 0.05M ADA, 0.8M potassium sodium tartrate, pH 6.8, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.799295 56.06
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 57.707 α = 90 b = 57.707 β = 90 c = 149.582 γ = 90
Symmetry Space Group P 41 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MAR scanner 345 mm plate MULTI-LAYER OSMIC OPTICS 2008-06-03 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE MACSCIENCE 1.54178
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.73 19.7 99.6 0.056 47.5 26.8 27271 27271
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.73 1.83 97.9 0.12 25.5 24.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD FREE R 1.73 19.7 27271 27271 1361 99.6 0.159 0.158 0.158 0.21 0.1821 RANDOM 15.118
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
Coordinate Error Structure Solution Method Refinement High Resolution Refinement Low Resolution 4
RMS Deviations Key Refinement Restraint Deviation s_from_restr_planes 0.533 s_similar_adp_cmpnt 0.059 s_zero_chiral_vol 0.048 s_non_zero_chiral_vol 0.043 s_angle_d 0.024 s_anti_bump_dis_restr 0.013 s_bond_d 0.008 s_similar_dist s_rigid_bond_adp_cmpnt s_approx_iso_adps
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1512 Nucleic Acid Atoms Solvent Atoms 262 Heterogen Atoms 94
Software Software Software Name Purpose SHELX refinement PDB_EXTRACT data extraction MAR345 data collection XDS data reduction SADABS data scaling SHELXD phasing SHELXL-97 refinement