X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION729870% Tacsimate, 0.1 M Bis Tris propane, pH 7.0, vapor diffusion, temperature 298K
Crystal Properties
Matthews coefficientSolvent content
2.754.9
2.550.6

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 70.205α = 90
b = 155.717β = 90
c = 158.768γ = 90
Symmetry
Space GroupC 2 2 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARMOSAIC 300 mm CCD2007-08-22MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 23-ID-D0.9184APS23-ID-D

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
125092.30.0876.654336
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
22.0766.60.69153879

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT24054222274092.180.2260.2240.271RANDOM46.061
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
5.32-3.17-2.15
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.731
r_dihedral_angle_4_deg15.025
r_dihedral_angle_3_deg13.636
r_dihedral_angle_1_deg5.07
r_scangle_it3.19
r_mcangle_it2.215
r_scbond_it2.109
r_mcbond_it1.317
r_angle_refined_deg1.188
r_angle_other_deg0.848
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.731
r_dihedral_angle_4_deg15.025
r_dihedral_angle_3_deg13.636
r_dihedral_angle_1_deg5.07
r_scangle_it3.19
r_mcangle_it2.215
r_scbond_it2.109
r_mcbond_it1.317
r_angle_refined_deg1.188
r_angle_other_deg0.848
r_mcbond_other0.321
r_chiral_restr0.071
r_bond_refined_d0.01
r_gen_planes_refined0.005
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms5415
Nucleic Acid Atoms
Solvent Atoms195
Heterogen Atoms

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
MOLREPphasing
REFMACrefinement
PDB_EXTRACTdata extraction