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Structure of the Serratia marcescens hemophore receptor HasR in complex with its hemophore HasA and heme
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8 291 2 M NaCl, 100 mM Tris, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Crystal Properties Matthews coefficient Solvent content 4.1 70
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 157.02 α = 90 b = 163.4 β = 90 c = 595.53 γ = 90
Symmetry Space Group F 2 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2006-04-29 M SINGLE WAVELENGTH 2 1 x-ray CCD MARMOSAIC 225 mm CCD 2006-11-24 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID29 1.00 ESRF ID29 2 SYNCHROTRON SLS BEAMLINE X06SA 0.97152,0.97897,0.97921 SLS X06SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 2.56 49.174 91 0.164 10.21 6.03 111662 -3 48.146
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1,2 2.56 2.71 63.5 0.722 1.59 2.81
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MAD 2.7 49.174 99334 99334 4959 95.03 0.2406 0.2389 0.2354 0.2739 0.2692 93.25
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -19.117 -12.415 8.215
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 11.636 f_angle_d 0.535 f_chiral_restr 0.037 f_bond_d 0.01 f_plane_restr 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 14146 Nucleic Acid Atoms Solvent Atoms 43 Heterogen Atoms 128
Software Software Software Name Purpose PHENIX refinement ADSC data collection XDS data reduction XDS data scaling SHARP phasing