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Crystal Structure of Alpha-14 Giardin
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 4.6 277 100 mM sodium acetate pH 4.6 and 15% (w/v) PEG 20000, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.05 40.05
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 64.012 α = 90 b = 65.305 β = 90 c = 75.848 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray CCD MARMOSAIC 325 mm CCD 2007-04-23 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL11-1 SSRL BL11-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.6 50 100 42635 42635
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 1.6 50 42635 42574 2147 99.89 0.199 0.198 0.228 0.2229 RANDOM 20.102
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.06 -0.1 0.04
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 28.269 r_dihedral_angle_4_deg 18.11 r_dihedral_angle_3_deg 11.209 r_dihedral_angle_1_deg 4.967 r_scangle_it 3.634 r_scbond_it 2.341 r_mcangle_it 1.475 r_angle_refined_deg 1.182 r_mcbond_it 0.906 r_nbtor_refined 0.307
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 28.269 r_dihedral_angle_4_deg 18.11 r_dihedral_angle_3_deg 11.209 r_dihedral_angle_1_deg 4.967 r_scangle_it 3.634 r_scbond_it 2.341 r_mcangle_it 1.475 r_angle_refined_deg 1.182 r_mcbond_it 0.906 r_nbtor_refined 0.307 r_nbd_refined 0.203 r_xyhbond_nbd_refined 0.142 r_symmetry_vdw_refined 0.136 r_symmetry_hbond_refined 0.126 r_metal_ion_refined 0.086 r_chiral_restr 0.081 r_bond_refined_d 0.01 r_gen_planes_refined 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2494 Nucleic Acid Atoms Solvent Atoms 255 Heterogen Atoms 1
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction HKL-2000 data collection HKL-2000 data reduction HKL-2000 data scaling PHASER phasing