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Thermodynamic and structure guided design of statin hmg-coa reductase inhibitors
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8 293 protein 15-20 mg/ml, Ligand (saturated),PEG 4000, MgCl2 0.2M, Tris-HCL pH8 0.1M, 7-10 days, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.25 45.41
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 73.94 α = 90 b = 173.51 β = 119.18 c = 76.4 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210 2003-04-19 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 17-ID 1.0000 APS 17-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.1 30 88.6 0.085 11.8 86863
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.1 2.18 45.2 0.248 4420
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2.12 30 84267 8471 88.69 0.2 0.196 0.2003 0.236 0.2359 RANDOM 35.169
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.36 0.57 -0.54 -0.26
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.391 r_scangle_it 2.697 r_scbond_it 1.527 r_angle_refined_deg 1.251 r_mcangle_it 1.097 r_angle_other_deg 0.771 r_mcbond_it 0.57 r_nbd_other 0.227 r_nbd_refined 0.196 r_symmetry_vdw_other 0.191
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.391 r_scangle_it 2.697 r_scbond_it 1.527 r_angle_refined_deg 1.251 r_mcangle_it 1.097 r_angle_other_deg 0.771 r_mcbond_it 0.57 r_nbd_other 0.227 r_nbd_refined 0.196 r_symmetry_vdw_other 0.191 r_symmetry_hbond_refined 0.19 r_xyhbond_nbd_refined 0.147 r_symmetry_vdw_refined 0.12 r_nbtor_other 0.081 r_chiral_restr 0.064 r_bond_refined_d 0.01 r_gen_planes_refined 0.004 r_bond_other_d 0.002 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 12282 Nucleic Acid Atoms Solvent Atoms 395 Heterogen Atoms 168
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction ADSC data collection HKL-2000 data reduction