☰ Navigation Tabs
Crystal structure of uncharacterized protein PF0695
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7 298 0.2M Ammonium(tri-)citrate pH 7.0, 20% PEG 3350, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 3.73 67.02
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 59.84 α = 90 b = 119.534 β = 90 c = 181.91 γ = 90
Symmetry Space Group I 2 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MAR CCD 165 mm 2008-02-01 M SINGLE WAVELENGTH 2 1 x-ray 100 CCD ADSC QUANTUM 315 2008-01-25 M SINGLE WAVELENGTH 1,2 1
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X4C 0.9793 NSLS X4C 2 SYNCHROTRON NSLS BEAMLINE X29A 0.9790 NSLS X29A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 2.43 50 99 0.107 7.7 12 24050 24050
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1,2 2.43 2.49 98.6 0.744 0.547 2.74 12.2 2337
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.43 34.69 24031 24031 1234 95.99 0.188 0.188 0.185 0.1837 0.226 0.222 RANDOM 56.504
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.2 0.4 -1.6
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.617 r_dihedral_angle_3_deg 16.874 r_dihedral_angle_4_deg 13.563 r_scangle_it 7.656 r_mcangle_it 5.876 r_scbond_it 5.576 r_dihedral_angle_1_deg 5.144 r_mcbond_it 4.403 r_angle_refined_deg 1.29 r_nbtor_refined 0.317
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.617 r_dihedral_angle_3_deg 16.874 r_dihedral_angle_4_deg 13.563 r_scangle_it 7.656 r_mcangle_it 5.876 r_scbond_it 5.576 r_dihedral_angle_1_deg 5.144 r_mcbond_it 4.403 r_angle_refined_deg 1.29 r_nbtor_refined 0.317 r_symmetry_hbond_refined 0.249 r_nbd_refined 0.224 r_symmetry_vdw_refined 0.217 r_xyhbond_nbd_refined 0.173 r_chiral_restr 0.078 r_bond_refined_d 0.013 r_gen_planes_refined 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2947 Nucleic Acid Atoms Solvent Atoms 75 Heterogen Atoms
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction CBASS data collection HKL-2000 data reduction SHELXD phasing SHELXE model building