3C00

Crystal structural of the mutated G247T EscU/SpaS C-terminal domain


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1MICROBATCH7.5293Tris, HEPES, Peg3350, NaCl, pH 7.5, Microbatch, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
1.412.08

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 26.969α = 90
b = 53.884β = 90
c = 59.75γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 3152007-01-01MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONALS BEAMLINE 8.2.21.00000ALS8.2.2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.415099.40.05711.412.9172451714222
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.411.4799.90.6958.31674

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT1.4140172451708886799.080.2170.2170.2160.236RANDOM8.485
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.26-0.23-0.02
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.325
r_dihedral_angle_4_deg16.129
r_dihedral_angle_3_deg12.537
r_dihedral_angle_1_deg7.134
r_scangle_it2.387
r_scbond_it1.95
r_angle_refined_deg1.503
r_mcangle_it1.212
r_mcbond_it1.067
r_angle_other_deg0.964
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg38.325
r_dihedral_angle_4_deg16.129
r_dihedral_angle_3_deg12.537
r_dihedral_angle_1_deg7.134
r_scangle_it2.387
r_scbond_it1.95
r_angle_refined_deg1.503
r_mcangle_it1.212
r_mcbond_it1.067
r_angle_other_deg0.964
r_mcbond_other0.259
r_nbd_refined0.255
r_symmetry_vdw_other0.243
r_nbtor_refined0.184
r_nbd_other0.178
r_symmetry_hbond_refined0.178
r_symmetry_vdw_refined0.14
r_xyhbond_nbd_refined0.107
r_nbtor_other0.086
r_chiral_restr0.085
r_bond_refined_d0.013
r_gen_planes_refined0.006
r_bond_other_d0.004
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms814
Nucleic Acid Atoms
Solvent Atoms45
Heterogen Atoms

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
REFMACrefinement
PDB_EXTRACTdata extraction
HKL-2000data collection
HKL-2000data reduction
HKL-2000data scaling
PHASERphasing