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Structure of phosphorylated Thr160 CDK2/cyclin A in complex with the inhibitor meriolin 5
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7 277 ammonium sulphate, potassium chloride, HEPES pH7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.86 56.96
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 74.146 α = 90 b = 133.957 β = 90 c = 147.837 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MAR CCD 165 mm 2007-07-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ELETTRA BEAMLINE 5.2R 1.0 ELETTRA 5.2R
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 20 99.3 0.087 11.1 65608 2 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.3 2.42 98.3 0.439 3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2.3 20 65469 3322 99.15 0.197 0.194 0.1903 0.24 0.2329 RANDOM 10.456
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.15 -0.92 0.76
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.958 r_dihedral_angle_4_deg 16.087 r_dihedral_angle_3_deg 15.525 r_dihedral_angle_1_deg 6.561 r_scangle_it 1.656 r_angle_refined_deg 1.316 r_scbond_it 1.033 r_mcangle_it 0.792 r_mcbond_it 0.449 r_nbtor_refined 0.298
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.958 r_dihedral_angle_4_deg 16.087 r_dihedral_angle_3_deg 15.525 r_dihedral_angle_1_deg 6.561 r_scangle_it 1.656 r_angle_refined_deg 1.316 r_scbond_it 1.033 r_mcangle_it 0.792 r_mcbond_it 0.449 r_nbtor_refined 0.298 r_symmetry_hbond_refined 0.295 r_nbd_refined 0.186 r_symmetry_vdw_refined 0.156 r_xyhbond_nbd_refined 0.137 r_chiral_restr 0.097 r_bond_refined_d 0.008 r_gen_planes_refined 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8797 Nucleic Acid Atoms Solvent Atoms 494 Heterogen Atoms 42
Software Software Software Name Purpose MOSFLM data reduction SCALA data scaling REFMAC refinement PDB_EXTRACT data extraction MAR345 data collection MOLREP phasing