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H240A variant of human ferrochelatase
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 291 0.1M Bis-Tris, 25% PEG 3350, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Crystal Properties Matthews coefficient Solvent content 2.77 55.6
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.051 α = 90 b = 93.414 β = 90 c = 110.659 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 210 CCD ADSC QUANTUM 315r 2006-10-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.2.2 1.0 ALS 8.2.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.7 50 98.9 14 163439 161643 3 3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.7 41.88 163439 161643 5058 99.82 0.1836 0.1738 0.1717 0.1706 0.2137 0.2129 RANDOM 17.2211
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.22 -0.62 0.84
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.124 r_dihedral_angle_4_deg 18.525 r_dihedral_angle_3_deg 14.786 r_dihedral_angle_1_deg 5.87 r_scangle_it 5.758 r_scbond_it 3.628 r_angle_refined_deg 2.49 r_mcangle_it 2.354 r_mcbond_it 1.451 r_chiral_restr 0.182
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.124 r_dihedral_angle_4_deg 18.525 r_dihedral_angle_3_deg 14.786 r_dihedral_angle_1_deg 5.87 r_scangle_it 5.758 r_scbond_it 3.628 r_angle_refined_deg 2.49 r_mcangle_it 2.354 r_mcbond_it 1.451 r_chiral_restr 0.182 r_bond_refined_d 0.029 r_gen_planes_refined 0.014
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5766 Nucleic Acid Atoms Solvent Atoms 729 Heterogen Atoms 188
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction ADSC data collection HKL-2000 data reduction HKL-2000 data scaling CNS phasing