30IB | pdb_000030ib

NMR Solution Structure of Cold Shock Protein CspA


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC500 uM [U-100% 13C; U-100% 15N] Mesophilic cold shock protein, 50 mM potassium phosphate, 100 mM KCl, 0.1 mM EDTA90% H2O/10% D2O06.51 atm283Bruker AVANCE III HD 700
23D HNCACB500 uM [U-100% 13C; U-100% 15N] Mesophilic cold shock protein, 50 mM potassium phosphate, 100 mM KCl, 0.1 mM EDTA90% H2O/10% D2O06.51 atm283Bruker AVANCE III HD 700
33D HN(COCA)CB500 uM [U-100% 13C; U-100% 15N] Mesophilic cold shock protein, 50 mM potassium phosphate, 100 mM KCl, 0.1 mM EDTA90% H2O/10% D2O06.51 atm283Bruker AVANCE III HD 700
43D HNCO500 uM [U-100% 13C; U-100% 15N] Mesophilic cold shock protein, 50 mM potassium phosphate, 100 mM KCl, 0.1 mM EDTA90% H2O/10% D2O06.51 atm283Bruker AVANCE III HD 700
53D HN(CA)CO500 uM [U-100% 13C; U-100% 15N] Mesophilic cold shock protein, 50 mM potassium phosphate, 100 mM KCl, 0.1 mM EDTA90% H2O/10% D2O06.51 atm283Bruker AVANCE III HD 700
63D HBHA(CO)NH500 uM [U-100% 13C; U-100% 15N] Mesophilic cold shock protein, 50 mM potassium phosphate, 100 mM KCl, 0.1 mM EDTA90% H2O/10% D2O06.51 atm283Bruker AVANCE III HD 700
73D HCCH-TOCSY500 uM [U-100% 13C; U-100% 15N] Mesophilic cold shock protein, 50 mM potassium phosphate, 100 mM KCl, 0.1 mM EDTA90% H2O/10% D2O06.51 atm283Bruker AVANCE III HD 700
83D HCCH-TOCSY500 uM [U-100% 13C; U-100% 15N] Mesophilic cold shock protein, 50 mM potassium phosphate, 100 mM KCl, 0.1 mM EDTA90% H2O/10% D2O06.51 atm283Bruker AVANCE III HD 700
92D 1H-13C HSQC500 uM [U-100% 13C; U-100% 15N] Mesophilic cold shock protein, 50 mM potassium phosphate, 100 mM KCl, 0.1 mM EDTA90% H2O/10% D2O06.51 atm283Bruker AVANCE III HD 700
102D 1H-13C HSQC aromatic500 uM [U-100% 13C; U-100% 15N] Mesophilic cold shock protein, 50 mM potassium phosphate, 100 mM KCl, 0.1 mM EDTA90% H2O/10% D2O06.51 atm283Bruker AVANCE III HD 700
112D (HB)CB(CGCD)HD500 uM [U-100% 13C; U-100% 15N] Mesophilic cold shock protein, 50 mM potassium phosphate, 100 mM KCl, 0.1 mM EDTA90% H2O/10% D2O06.51 atm283Bruker AVANCE III 800
122D (HB)CB(CGCDCE)HE500 uM [U-100% 13C; U-100% 15N] Mesophilic cold shock protein, 50 mM potassium phosphate, 100 mM KCl, 0.1 mM EDTA90% H2O/10% D2O06.51 atm283Bruker AVANCE III 800
133D 1H-13C NOESY aliphatic500 uM [U-100% 13C; U-100% 15N] Mesophilic cold shock protein, 50 mM potassium phosphate, 100 mM KCl, 0.1 mM EDTA90% H2O/10% D2O06.51 atm283Bruker AVANCE III HD 700
143D 1H-13C NOESY aromatic500 uM [U-100% 13C; U-100% 15N] Mesophilic cold shock protein, 50 mM potassium phosphate, 100 mM KCl, 0.1 mM EDTA90% H2O/10% D2O06.51 atm283Bruker AVANCE III 800
153D 1H-15N NOESY500 uM [U-100% 13C; U-100% 15N] Mesophilic cold shock protein, 50 mM potassium phosphate, 100 mM KCl, 0.1 mM EDTA90% H2O/10% D2O06.51 atm283Bruker AVANCE III HD 700
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III HD700
2BrukerAVANCE III800
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsCNS
torsion angle dynamicsX-PLOR NIH
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionTopSpinBruker Biospin
2processingTopSpinBruker Biospin
3processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4peak pickingCcpNmr AnalysisCCPN
5chemical shift assignmentCcpNmr AnalysisCCPN
6data analysisCcpNmr AnalysisCCPN
7structure calculationCYANAGuntert, Mumenthaler and Wuthrich
8refinementCNSBrunger, Adams, Clore, Gros, Nilges and Read
9refinementX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore