2ZW0

Crystal structure of a Streptococcal protein G B1 mutant


X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
1.7228.3

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 25.764α = 90
b = 36.36β = 90
c = 93.688γ = 90
Symmetry
Space GroupC 2 2 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-rayCCDADSC QUANTUM 2702007-05-24MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONPHOTON FACTORY BEAMLINE BL-17A1.000Photon FactoryBL-17A

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.4506.5905211.346

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.420857443099.820.178650.17650.2235RANDOM12.012
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
1.1-0.25-0.85
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.66
r_dihedral_angle_3_deg11.628
r_dihedral_angle_1_deg4.709
r_scangle_it3.101
r_scbond_it2.114
r_mcangle_it1.256
r_angle_refined_deg1.216
r_mcbond_it0.826
r_symmetry_vdw_refined0.773
r_nbtor_refined0.305
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.66
r_dihedral_angle_3_deg11.628
r_dihedral_angle_1_deg4.709
r_scangle_it3.101
r_scbond_it2.114
r_mcangle_it1.256
r_angle_refined_deg1.216
r_mcbond_it0.826
r_symmetry_vdw_refined0.773
r_nbtor_refined0.305
r_nbd_refined0.201
r_xyhbond_nbd_refined0.126
r_symmetry_hbond_refined0.094
r_chiral_restr0.061
r_bond_refined_d0.009
r_gen_planes_refined0.007
r_bond_other_d
r_angle_other_deg
r_dihedral_angle_4_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms450
Nucleic Acid Atoms
Solvent Atoms90
Heterogen Atoms10

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data collection
HKL-2000data reduction
HKL-2000data scaling
MOLREPphasing