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Tet repressor (class D) in complex with 7-Iodotetracycline
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.2 10MICROL PROTEIN (0.2MM TETR, 1MM IODOTC, 5MM MGCL2), 5MICROL RESERVOIR (35% AMMONIUM SULPHATE, TRIS-HCL PH 7.2) VAPOUR DIFFUSSION HANGING DROP
Crystal Properties Matthews coefficient Solvent content 2.31 42
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 68.86 α = 90 b = 68.86 β = 90 c = 180.94 γ = 90
Symmetry Space Group I 41 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 277 IMAGE PLATE MARRESEARCH MIRRORS 1993-04-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X31 EMBL/DESY, HAMBURG X31
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.45 64.55 99 0.06 4 7120 41.55
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT NONE 2.5 64.55 7120 777 99.65 0.16847 0.16163 0.1648 0.23018 0.2291 RANDOM 39.81
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.88 0.88 -1.76
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.29 r_dihedral_angle_3_deg 21.354 r_dihedral_angle_4_deg 16.872 r_dihedral_angle_1_deg 5.53 r_scangle_it 3.704 r_scbond_it 2.22 r_angle_refined_deg 1.612 r_mcangle_it 1.398 r_angle_other_deg 1.037 r_mcbond_it 0.72
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.29 r_dihedral_angle_3_deg 21.354 r_dihedral_angle_4_deg 16.872 r_dihedral_angle_1_deg 5.53 r_scangle_it 3.704 r_scbond_it 2.22 r_angle_refined_deg 1.612 r_mcangle_it 1.398 r_angle_other_deg 1.037 r_mcbond_it 0.72 r_mcbond_other 0.127 r_chiral_restr 0.097 r_bond_refined_d 0.015 r_gen_planes_refined 0.007 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1640 Nucleic Acid Atoms Solvent Atoms 40 Heterogen Atoms 33
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction