2RS9 | pdb_00002rs9

Solution structure of the bromodomain of human BRPF1 in complex with histone H4K5ac peptide

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	3D 1H-15N NOESY	1.5 mM H4K5ac-1, 0.54 mM [U-99% 13C; U-99% 15N] Bromodomain-2	90% H2O/10% D2O	100	6.5	ambient	288
2	3D 1H-13C NOESY	1.5 mM H4K5ac-1, 0.54 mM [U-99% 13C; U-99% 15N] Bromodomain-2	90% H2O/10% D2O	100	6.5	ambient	288
3	13C-edited (F1)	1.5 mM H4K5ac-1, 0.54 mM [U-99% 13C; U-99% 15N] Bromodomain-2	90% H2O/10% D2O	100	6.5	ambient	288
4	13C/15N-filtered (F3) 3D NOESY	1.5 mM H4K5ac-1, 0.54 mM [U-99% 13C; U-99% 15N] Bromodomain-2	90% H2O/10% D2O	100	6.5	ambient	288

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Varian	INOVA	800

NMR Refinement
Method	Details	Software
torsion angle dynamics, molecular dynamics		NMRPipe

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	processing	NMRPipe	20100701	Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2	processing	NMRView	5.0.4	Johnson, One Moon Scientific
3	data analysis	KUJIRA	0.9905	Kobayashi, N.
4	structure solution	CYANA	2.1	Guntert, Mumenthaler and Wuthrich
5	refinement	Amber	5	Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm
6	refinement	CYANA