2RRD

Structure of HRDC domain from human Bloom syndrome protein, BLM


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.5mM [U-98% 13C; U-98% 15N] BLM-1, 50mM TRIS-2, 100mM sodium chloride-390% H2O/10% D2O1007.5ambient303
23D HNCACB0.5mM [U-98% 13C; U-98% 15N] BLM-1, 50mM TRIS-2, 100mM sodium chloride-390% H2O/10% D2O1007.5ambient303
33D CBCA(CO)NH0.5mM [U-98% 13C; U-98% 15N] BLM-1, 50mM TRIS-2, 100mM sodium chloride-390% H2O/10% D2O1007.5ambient303
43D HNCA0.5mM [U-98% 13C; U-98% 15N] BLM-1, 50mM TRIS-2, 100mM sodium chloride-390% H2O/10% D2O1007.5ambient303
53D HN(CO)CA0.5mM [U-98% 13C; U-98% 15N] BLM-1, 50mM TRIS-2, 100mM sodium chloride-390% H2O/10% D2O1007.5ambient303
63D C(CO)NH0.5mM [U-98% 13C; U-98% 15N] BLM-1, 50mM TRIS-2, 100mM sodium chloride-390% H2O/10% D2O1007.5ambient303
73D H(CCO)NH0.5mM [U-98% 13C; U-98% 15N] BLM-1, 50mM TRIS-2, 100mM sodium chloride-390% H2O/10% D2O1007.5ambient303
84D H(CCO)NH0.5mM [U-98% 13C; U-98% 15N] BLM-1, 50mM TRIS-2, 100mM sodium chloride-390% H2O/10% D2O1007.5ambient303
93D HNHB1mM [U-100% 15N] BLM-4, 50mM d11-TRIS-5, 100mM sodium chloride-690% H2O/10% D2O1007.5ambient303
103D HN(CO)HB0.5mM [U-98% 13C; U-98% 15N] BLM-1, 50mM TRIS-2, 100mM sodium chloride-390% H2O/10% D2O1007.5ambient303
113D 1H-15N NOESY1mM [U-100% 15N] BLM-4, 50mM d11-TRIS-5, 100mM sodium chloride-690% H2O/10% D2O1007.5ambient303
123D 1H-13C NOESY1mM [U-98% 13C; U-98% 15N] BLM-7, 50mM d11-TRIS-8, 100mM sodium chloride-9100% D2O1007.5ambient303
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAvance600
NMR Refinement
MethodDetailsSoftware
simulated annealingSPARKY
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1chemical shift assignmentSPARKY3.113Goddard
2peak pickingSPARKY3.113Goddard
3processingNMRPipe5.0Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4structure solutionCYANA3.0Guntert, Mumenthaler and Wuthrich
5refinementCNS1.1Brunger, Adams, Clore, Gros, Nilges and Read