2RR6 | pdb_00002rr6

Solution structure of the leucine rich repeat of human acidic leucine-rich nuclear phosphoprotein 32 family member B

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	3D 1H-15N NOESY	1.3mM [U-13C; U-15N] protein-1, 20mM [U-2H] TRIS-2, 100mM sodium chloride-3, 1mM [U-2H] DTT-4, 0.02 % sodium azide-5	90% H2O/10% D2O	120	7.0	ambient	296
2	3D 1H-13C NOESY	1.3mM [U-13C; U-15N] protein-1, 20mM [U-2H] TRIS-2, 100mM sodium chloride-3, 1mM [U-2H] DTT-4, 0.02 % sodium azide-5	90% H2O/10% D2O	120	7.0	ambient	296
3	2D 1H-15N IPAP HSQC	0.5mM [U-13C; U-15N] protein-6, 20mM [U-2H] TRIS-7, 100mM sodium chloride-8, 1mM [U-2H] DTT-9, 0.02 % sodium azide-10, 5 % C12E5/n-hexanol-11	90% H2O/10% D2O	120	7.0	ambient	296
4	2D 1H-15N IPAP HSQC	0.5mM [U-13C; U-15N] protein-12, 20mM [U-2H] TRIS-13, 100mM sodium chloride-14, 1mM [U-2H] DTT-15, 0.02 % sodium azide-16, 9 % polyacrylamide gel-17	90% H2O/10% D2O	120	7.0	ambient	296

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	900
2	Bruker	AVANCE	600

NMR Refinement
Method	Details	Software
torsion angle dynamics, simulated annealing		Amber

NMR Ensemble Information
Conformer Selection Criteria	target function
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	refinement	Amber		Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm
2	structure solution	CYANA		Guntert, Mumenthaler and Wuthrich
3	collection	XwinNMR		Bruker Biospin
4	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
5	data analysis	KUJIRA		N. Kobayashi
6	data analysis	NMRView		Johnson, One Moon Scientific