2RR6

Solution structure of the leucine rich repeat of human acidic leucine-rich nuclear phosphoprotein 32 family member B


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D 1H-15N NOESY1.3mM [U-13C; U-15N] protein-1, 20mM [U-2H] TRIS-2, 100mM sodium chloride-3, 1mM [U-2H] DTT-4, 0.02 % sodium azide-590% H2O/10% D2O1207.0ambient296
23D 1H-13C NOESY1.3mM [U-13C; U-15N] protein-1, 20mM [U-2H] TRIS-2, 100mM sodium chloride-3, 1mM [U-2H] DTT-4, 0.02 % sodium azide-590% H2O/10% D2O1207.0ambient296
32D 1H-15N IPAP HSQC0.5mM [U-13C; U-15N] protein-6, 20mM [U-2H] TRIS-7, 100mM sodium chloride-8, 1mM [U-2H] DTT-9, 0.02 % sodium azide-10, 5 % C12E5/n-hexanol-1190% H2O/10% D2O1207.0ambient296
42D 1H-15N IPAP HSQC0.5mM [U-13C; U-15N] protein-12, 20mM [U-2H] TRIS-13, 100mM sodium chloride-14, 1mM [U-2H] DTT-15, 0.02 % sodium azide-16, 9 % polyacrylamide gel-1790% H2O/10% D2O1207.0ambient296
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE900
2BrukerAVANCE600
NMR Refinement
MethodDetailsSoftware
torsion angle dynamics, simulated annealingAmber
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementAmberCase, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm
2structure solutionCYANAGuntert, Mumenthaler and Wuthrich
3collectionXwinNMRBruker Biospin
4processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
5data analysisKUJIRAN. Kobayashi
6data analysisNMRViewJohnson, One Moon Scientific