2RCJ

Solution structure of human Immunoglobulin M


SOLUTION SCATTERING
Solution Scattering Data Acquistion1
Scattering Typex-ray
Radiation/Neutron SourceSRS DARESBURY
SynchrotronY
Beamline Type7.3
Detector TypeLINEAR DETECTOR
Detector Manufacturer Details
Temperature (K)293
pH7
Numer of Time Frames Used1
Protein Concentration Range (mg/mL)2-30
Sample Buffer200 MM NACL 12 MM NAHPO4 0.05% NA AZIDE
Data Reduction SoftwareSWANAL
Guiner Mean Radius Of Gyration (nm)12.17
Sigma Mean Radius Of Gyration0.34
R(XS-1) Mean Cross Sectional Radii (nm)6.06
R(XS-1) Sigma Mean Cross Sectional Radii0.19
R(XS-2) Mean Cross Sectional Radii (nm)1.79
R(XS-2) Sigma Mean Cross Sectional Radii0.12
P(R) Protein Length (nm)
Solution Scattering Data Analysis and Model Fitting
MethodSoftwareSoftware AuthorsStarting ModelConformers, Number CalculatedConformers, Number SubmittedConformers, Selection CriteriaBest Representative ConformerOther Details
FRODO, INSIGHT, SCTPL21THE DEPOSITED STRUCTURE CONTAINS ONLY CA ATOMS. THE IGM COORDINATES ARE PROVIDED FROM AN EARLY STUDY IN WHICH A MANUAL FIT METHOD BAS ...THE DEPOSITED STRUCTURE CONTAINS ONLY CA ATOMS. THE IGM COORDINATES ARE PROVIDED FROM AN EARLY STUDY IN WHICH A MANUAL FIT METHOD BASED ON KNOWN CRYSTAL STRUCTURES FOR IGG WAS USED TO DETERMINE STRUCTURES FOR INTACT IGM AND ITS FAB, FAB'2, FC5 AND IGM-S MONOMER SUBUNITS. THESE CRYSTAL STRUCTURES ORIGINATED FROM HUMAN FAB KOL (PDB CODE 2FB4) AND HUMAN FC (PDB CODE 1FC1). THIS PROCEDURE IS APPROXIMATE AND THE IGM MODEL IS NOT CONSIDERED TO BE OPTIMAL OR REFINED AGAINST THE X-RAY SCATTERING DATA.

Diffraction

Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1OTHER1.54
2OTHER1.54