☰ Navigation Tabs
met-Trout IV hemoglobin at pH 6.3
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.3 298 20% PEG 4K, 0.1 M BisTris , pH 6.3, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.17 43.33
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 57.063 α = 90 b = 62.998 β = 92.2 c = 77.016 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 93 CCD MARMOSAIC 225 mm CCD 2007-03-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 21-ID-D 0.97893 APS 21-ID-D
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 76.9 42904
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 1.9 76.92 42596 2132 98.6 0.172 0.17 0.1718 0.22 0.2223 RANDOM 20.883
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.4 -0.91 -2.1 1.63
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.851 r_dihedral_angle_4_deg 16.415 r_dihedral_angle_3_deg 15.243 r_dihedral_angle_1_deg 5.095 r_scangle_it 2.691 r_scbond_it 1.866 r_angle_refined_deg 1.408 r_mcangle_it 1.043 r_mcbond_it 0.728 r_nbtor_refined 0.304
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.851 r_dihedral_angle_4_deg 16.415 r_dihedral_angle_3_deg 15.243 r_dihedral_angle_1_deg 5.095 r_scangle_it 2.691 r_scbond_it 1.866 r_angle_refined_deg 1.408 r_mcangle_it 1.043 r_mcbond_it 0.728 r_nbtor_refined 0.304 r_nbd_refined 0.211 r_symmetry_vdw_refined 0.179 r_xyhbond_nbd_refined 0.148 r_symmetry_hbond_refined 0.139 r_chiral_restr 0.092 r_bond_refined_d 0.016 r_gen_planes_refined 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4496 Nucleic Acid Atoms Solvent Atoms 352 Heterogen Atoms 192
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction HKL-2000 data collection HKL-2000 data reduction SCALEPACK data scaling MOLREP phasing