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Crystal structure of uncharacterized protein Atu0299
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 4.6 297 0.1M Na(OAC) pH 4.6, 3.5M Sodium formate. THE CRYSTAL WAS OBTAINED BY IN SITU PROTEOLYSIS, PROTEIN SAMPLE WAS MIXED WITH 1:100 WEIGHT TO WEIGHT RATIO WITH CHYMOTRYPSIN IMMEDIATELY PRIOR TO SETTING UP CRYSTALLIZATION, VAPOR DIFFUSION, SITTING DROP, temperature 297K
Crystal Properties Matthews coefficient Solvent content 3.33 63.03
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 111.347 α = 90 b = 111.347 β = 90 c = 136.02 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210 2007-05-05 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON CHESS BEAMLINE A1 0.97600 CHESS A1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 50 99.9 0.061 0.061 10.9 7.5 88206 88206 28.4
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.8 1.86 99.3 0.749 0.749 1.92 6.1 8762
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.8 50 29193 29193 967 99.95 0.19998 0.19998 0.19931 0.1994 0.22067 0.2234 RANDOM 28.7
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.32 0.16 0.32 -0.48
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.616 r_dihedral_angle_4_deg 19.284 r_dihedral_angle_3_deg 12.917 r_dihedral_angle_1_deg 5.286 r_scangle_it 3.501 r_scbond_it 2.384 r_mcangle_it 1.379 r_angle_refined_deg 1.138 r_mcbond_it 0.944 r_nbtor_refined 0.301
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.616 r_dihedral_angle_4_deg 19.284 r_dihedral_angle_3_deg 12.917 r_dihedral_angle_1_deg 5.286 r_scangle_it 3.501 r_scbond_it 2.384 r_mcangle_it 1.379 r_angle_refined_deg 1.138 r_mcbond_it 0.944 r_nbtor_refined 0.301 r_symmetry_hbond_refined 0.234 r_symmetry_vdw_refined 0.215 r_nbd_refined 0.201 r_xyhbond_nbd_refined 0.149 r_chiral_restr 0.08 r_bond_refined_d 0.009 r_gen_planes_refined 0.004 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1490 Nucleic Acid Atoms Solvent Atoms 177 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement ADSC data collection HKL-2000 data reduction HKL-2000 data scaling SOLVE phasing