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Crystal structure of a Survivin-Borealin-INCENP core complex
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 6 293 50mM MES pH6, 10% PEG3350, VAPOR DIFFUSION, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.83 56.47
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 42.467 α = 90 b = 78.793 β = 90 c = 100.017 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X06SA 0.99 SLS X06SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.4 42 96 0.06 15.2 5.1 64114 15.4
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.4 1.48 80.1 0.392 0.327 2.6 3 7613
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.4 42 64044 3802 95.69 0.186 0.184 0.1924 0.202 0.2073 RANDOM 23.956
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.35 -0.14 -0.21
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.036 r_dihedral_angle_4_deg 19.407 r_dihedral_angle_3_deg 12.741 r_dihedral_angle_1_deg 4.422 r_scangle_it 3.321 r_sphericity_free 2.517 r_scbond_it 2.122 r_sphericity_bonded 1.738 r_mcangle_it 1.544 r_angle_refined_deg 1.326
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.036 r_dihedral_angle_4_deg 19.407 r_dihedral_angle_3_deg 12.741 r_dihedral_angle_1_deg 4.422 r_scangle_it 3.321 r_sphericity_free 2.517 r_scbond_it 2.122 r_sphericity_bonded 1.738 r_mcangle_it 1.544 r_angle_refined_deg 1.326 r_rigid_bond_restr 1.259 r_mcbond_it 1.013 r_nbtor_refined 0.308 r_symmetry_vdw_refined 0.214 r_nbd_refined 0.203 r_chiral_restr 0.139 r_xyhbond_nbd_refined 0.109 r_symmetry_hbond_refined 0.106 r_bond_refined_d 0.007 r_gen_planes_refined 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2090 Nucleic Acid Atoms Solvent Atoms 327 Heterogen Atoms 13
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction MOSFLM data reduction SCALA data scaling SHELXS phasing