2PWN

Crystal structure of BET3 homolog (13277653) from Mus musculus at 2.04 A resolution


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP277NANODROP, 0.4M NH4H2PO3, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Crystal Properties
Matthews coefficientSolvent content
2.2244.47

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 77.533α = 90
b = 77.533β = 90
c = 56.591γ = 120
Symmetry
Space GroupP 31 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 2102004-09-26MMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONALS BEAMLINE 8.2.10.99987, 0.97969, 0.97957ALS8.2.1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.0423.15699.80.070.07145.51280038.47
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.042.091000.6870.6872.14.7921

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT2.0423.1561277062399.740.1850.1850.1830.237RANDOM41.498
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.530.270.53-0.8
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.545
r_dihedral_angle_4_deg15.242
r_dihedral_angle_3_deg13.646
r_scangle_it7.537
r_dihedral_angle_1_deg6.125
r_scbond_it5.267
r_mcangle_it3.323
r_mcbond_it2.132
r_angle_refined_deg1.381
r_angle_other_deg0.835
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.545
r_dihedral_angle_4_deg15.242
r_dihedral_angle_3_deg13.646
r_scangle_it7.537
r_dihedral_angle_1_deg6.125
r_scbond_it5.267
r_mcangle_it3.323
r_mcbond_it2.132
r_angle_refined_deg1.381
r_angle_other_deg0.835
r_mcbond_other0.505
r_nbd_refined0.236
r_symmetry_vdw_refined0.223
r_nbtor_refined0.178
r_nbd_other0.168
r_xyhbond_nbd_refined0.158
r_symmetry_vdw_other0.15
r_symmetry_hbond_refined0.133
r_chiral_restr0.087
r_nbtor_other0.082
r_bond_refined_d0.016
r_gen_planes_refined0.005
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1197
Nucleic Acid Atoms
Solvent Atoms73
Heterogen Atoms15

Software

Software
Software NamePurpose
MolProbitymodel building
SHELXphasing
REFMACrefinement
SCALAdata scaling
PDB_EXTRACTdata extraction
ADSCdata collection
MOSFLMdata reduction
SHELXDphasing
SHARPphasing