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Arg475Gln Mutant of Mitochondrial Aldehyde Dehydrogenase, apo form, pseudo-merohedrally twinned
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1O05 PDB ENTRY 1O05
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.6 293 100 mM ACES (N-[2-Acetamido]-2-aminoethane sufonic acid), 5 mM MgCl2, 100 mM Guanidine HCl, 18% w/v PEG 6000, 6 mM DTT, pH 6.6, vapor diffusion, temperature 293K, pH 6.60
Crystal Properties Matthews coefficient Solvent content 2.069 41.15
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 101.472 α = 90 b = 175.85 β = 94.79 c = 101.458 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2003-08-03 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 14-BM-C APS 14-BM-C
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.15 25 97.5 0.061 13.6 186854 0.2 21.84
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.15 2.23 87.8 0.198
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R PDB ENTRY 1O05 2.15 10 180487 175614 8781 92.5 0.251 0.251 0.2644 0.314 0.3195 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
Coordinate Error Structure Solution Method Refinement High Resolution Refinement Low Resolution 31383
RMS Deviations Key Refinement Restraint Deviation s_similar_dist 0.036 s_anti_bump_dis_restr 0.031 s_similar_adp_cmpnt 0.027 s_from_restr_planes 0.019 s_angle_d 0.013 s_non_zero_chiral_vol 0.013 s_zero_chiral_vol 0.006 s_bond_d 0.005 s_rigid_bond_adp_cmpnt s_approx_iso_adps
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 30368 Nucleic Acid Atoms Solvent Atoms 1020 Heterogen Atoms
Software Software Software Name Purpose DENZO data reduction AMoRE phasing SHELXL-97 refinement SCALEPACK data scaling