X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP82982.5M (NH4)2SO4 20% Sucrose, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties
Matthews coefficientSolvent content
2.5651.96

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 47.897α = 90
b = 87.419β = 115
c = 52.898γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDSBC-22004-07-05MSINGLE WAVELENGTH
21x-ray100MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 19-ID0.97959APS19-ID
2SYNCHROTRONAPS BEAMLINE 19-ID0.97934APS19-ID

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1,21.615092.40.052122.441165-3
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.611.670.4361.249.24954

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT1.613039056208480.890.169070.16670.21423RANDOM16.471
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.33-0.61-0.17-0.01
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.376
r_dihedral_angle_4_deg20.824
r_dihedral_angle_3_deg13.893
r_dihedral_angle_1_deg6.055
r_scangle_it4.496
r_scbond_it2.987
r_mcangle_it1.733
r_mcbond_it1.638
r_angle_refined_deg1.579
r_angle_other_deg0.924
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg31.376
r_dihedral_angle_4_deg20.824
r_dihedral_angle_3_deg13.893
r_dihedral_angle_1_deg6.055
r_scangle_it4.496
r_scbond_it2.987
r_mcangle_it1.733
r_mcbond_it1.638
r_angle_refined_deg1.579
r_angle_other_deg0.924
r_mcbond_other0.293
r_symmetry_vdw_other0.273
r_nbd_refined0.234
r_nbd_other0.231
r_symmetry_hbond_refined0.191
r_xyhbond_nbd_refined0.185
r_nbtor_refined0.177
r_symmetry_vdw_refined0.14
r_chiral_restr0.087
r_nbtor_other0.087
r_bond_refined_d0.008
r_gen_planes_refined0.006
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2737
Nucleic Acid Atoms
Solvent Atoms500
Heterogen Atoms5

Software

Software
Software NamePurpose
REFMACrefinement
SBC-Collectdata collection
HKL-2000data reduction
HKL-2000data scaling
ARP/wARPmodel building