2NBC

Resonance assignments and structure determination of poneritoxin, omega-PONTX-Ae1a, from Anochetus emarginatus


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC2 mM omega-PONTX-Ae1a, 2 mM AMINO GROUP, 5 % D2O, 20 mM sodium phosphate95% H2O/5% D2O206ambient298
22D 1H-13C HSQC2 mM omega-PONTX-Ae1a, 2 mM AMINO GROUP, 5 % D2O, 20 mM sodium phosphate95% H2O/5% D2O206ambient298
32D 1H-1H TOCSY2 mM omega-PONTX-Ae1a, 2 mM AMINO GROUP, 5 % D2O, 20 mM sodium phosphate95% H2O/5% D2O206ambient298
42D 1H-1H NOESY2 mM omega-PONTX-Ae1a, 2 mM AMINO GROUP, 5 % D2O, 20 mM sodium phosphate95% H2O/5% D2O206ambient298
52D 1H-1H NOESY2 mM omega-PONTX-Ae1a, 2 mM AMINO GROUP, 100 % D2O, 20 mM sodium phosphate100% D2O206ambient298
62D 1H-13C HSQC2 mM omega-PONTX-Ae1a, 2 mM AMINO GROUP, 100 % D2O, 20 mM sodium phosphate100% D2O206ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAvance600
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsTOPSPIN
NMR Ensemble Information
Conformer Selection CriteriaBest stereochemical property judged by Molprobity
Conformers Calculated Total Number30
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionTOPSPINBruker Biospin
2processingTOPSPINBruker Biospin
3structure solutionCYANAGuntert, Mumenthaler and Wuthrich
4peak pickingCcpNmr_AnalysisCCPN
5chemical shift assignmentCcpNmr_AnalysisCCPN
6dihedral angle predictionTALOSCornilescu, Delaglio and Bax
7refinementCYANA