SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-13C HSQC550 uM DNA (5'-D(*GP*GP*(AZW)P*GP*G)-3'), 25 mM Tris-HCl, 50 mM KCl100% D2O717.4ambient298
22D 1H-13C HMBC550 uM DNA (5'-D(*GP*GP*(AZW)P*GP*G)-3'), 25 mM Tris-HCl, 50 mM KCl90% H2O/10% D2O717.4ambient298
32D 1H-31P TOCSY550 uM DNA (5'-D(*GP*GP*(AZW)P*GP*G)-3'), 25 mM Tris-HCl, 50 mM KCl100% D2O717.4ambient298
42D 1H-1H P.E. COSY550 uM DNA (5'-D(*GP*GP*(AZW)P*GP*G)-3'), 25 mM Tris-HCl, 50 mM KCl100% D2O717.4ambient298
52D 1H-1H NOESY550 uM DNA (5'-D(*GP*GP*(AZW)P*GP*G)-3'), 25 mM Tris-HCl, 50 mM KCl90% H2O/10% D2O717.4ambient298
62D 1H-1H NOESY550 uM DNA (5'-D(*GP*GP*(AZW)P*GP*G)-3'), 25 mM Tris-HCl, 50 mM KCl100% D2O717.4ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
NMR Refinement
MethodDetailsSoftware
simulated annealingsimulated annealing with cartesian angle dynamicsCNS
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionCNS1.1Brunger, Adams, Clore, Gros, Nilges and Read
2structure solutionARIA1.2Linge, O'Donoghue and Nilges
3refinementARIA1.2Linge, O'Donoghue and Nilges
4collectionTopSpin3.2Bruker Biospin
5processingTopSpin3.2Bruker Biospin
6chemical shift assignmentSparky3.114Goddard
7data analysisSparky3.114Goddard
8peak pickingSparky3.114Goddard