SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-15N HSQC | 1.2 mM [U-100% 15N] protein, 80 mM [U-100% 2H] DPC, 1 mM TSP, 50 mM sodium phosphate | 95% H2O/5% D2O | 130 | 4.5 | ambient | 315 | |
| 2 | 2D 1H-1H TOCSY | 1.2 mM [U-100% 15N] protein, 80 mM [U-100% 2H] DPC, 1 mM TSP, 50 mM sodium phosphate | 95% H2O/5% D2O | 130 | 4.5 | ambient | 315 | |
| 3 | 2D 1H-1H NOESY | 1.2 mM [U-100% 15N] protein, 80 mM [U-100% 2H] DPC, 1 mM TSP, 50 mM sodium phosphate | 95% H2O/5% D2O | 130 | 4.5 | ambient | 315 | |
| 4 | 3D 1H-15N TOCSY | 1.2 mM [U-100% 15N] protein, 80 mM [U-100% 2H] DPC, 1 mM TSP, 50 mM sodium phosphate | 95% H2O/5% D2O | 130 | 4.5 | ambient | 315 | |
| 5 | 3D 1H-15N NOESY | 1.2 mM [U-100% 15N] protein, 80 mM [U-100% 2H] DPC, 1 mM TSP, 50 mM sodium phosphate | 95% H2O/5% D2O | 130 | 4.5 | ambient | 315 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| simulated annealing | NMRPipe | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the least restraint violations |
| Conformers Calculated Total Number | 600 |
| Conformers Submitted Total Number | 6 |
| Representative Model | 1 (closest to the average) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | data analysis | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
| 2 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
| 3 | data analysis | Sparky | Goddard | |
| 4 | chemical shift assignment | Sparky | Goddard | |
| 5 | peak picking | Sparky | Goddard | |
| 6 | structure solution | X-PLOR NIH | 2.32 | Schwieters, Kuszewski, Tjandra and Clore |
| 7 | refinement | X-PLOR NIH | 2.32 | Schwieters, Kuszewski, Tjandra and Clore |
| 8 | collection | TopSpin | Bruker Biospin | |
| 9 | data analysis | TopSpin | Bruker Biospin | |
| 10 | structure evaluation | MolProbity | Ian W. Davis, Vincent B. Chen, Robert M. Immormino et. al | |














