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Solution NMR structure of a S72-S107 peptide of 18.5kDa murine myelin basic protein (MBP) in association with dodecylphosphocholine micelles
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 1.47 mM [U-100% 13C; U-100% 15N] S72-S107 MBP peptide, 50 mM potassium phosphate, 100 mM Deuterated Dodecylphosphocholine 90% H2O/10% D2O 6.5 ambient 285 2 3D HNCO 1.47 mM [U-100% 13C; U-100% 15N] S72-S107 MBP peptide, 50 mM potassium phosphate, 100 mM Deuterated Dodecylphosphocholine 90% H2O/10% D2O 6.5 ambient 285 3 3D HN(CA)CO 1.47 mM [U-100% 13C; U-100% 15N] S72-S107 MBP peptide, 50 mM potassium phosphate, 100 mM Deuterated Dodecylphosphocholine 90% H2O/10% D2O 6.5 ambient 285 4 3D HNCACB 1.47 mM [U-100% 13C; U-100% 15N] S72-S107 MBP peptide, 50 mM potassium phosphate, 100 mM Deuterated Dodecylphosphocholine 90% H2O/10% D2O 6.5 ambient 285 5 3D CBCA(CO)NH 1.47 mM [U-100% 13C; U-100% 15N] S72-S107 MBP peptide, 50 mM potassium phosphate, 100 mM Deuterated Dodecylphosphocholine 90% H2O/10% D2O 6.5 ambient 285 6 3D HACAN 1.47 mM [U-100% 13C; U-100% 15N] S72-S107 MBP peptide, 50 mM potassium phosphate, 100 mM Deuterated Dodecylphosphocholine 90% H2O/10% D2O 6.5 ambient 285 7 3D HCCH-TOCSY 1.47 mM [U-100% 13C; U-100% 15N] S72-S107 MBP peptide, 50 mM potassium phosphate, 100 mM Deuterated Dodecylphosphocholine 90% H2O/10% D2O 6.5 ambient 285
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600
NMR Refinement Method Details Software torsion angle dynamics NMRPipe
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 10500 Conformers Submitted Total Number 10 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 2 chemical shift assignment CARA Keller and Wuthrich 3 backbone phi/psi torsion angle prediction TALOS Cornilescu, Delaglio and Bax 4 structure solution TALOS Cornilescu, Delaglio and Bax 5 structure solution CS-ROSETTA Shen, Lange, Delaglio, Rossi, Aramini, Liu, Eletsky, Wu, Singarapu, Lemak, ... and Bax 6 refinement CS-ROSETTA Shen, Lange, Delaglio, Rossi, Aramini, Liu, Eletsky, Wu, Singarapu, Lemak, ... and Bax