2LRA

NMR Structure of Signal Sequence Deleted (SSD) Rv0603 Protein from Mycobacterium tuberculosis without N-terminal His-tag


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC20 mM sodium phosphate-1, 50 mM sodium chloride-2, 0.1 % sodium azide-3, 1 mM AEBSF protease inhibitor-4, 1 mM [U-99% 15N] Rv0603-SSD-593% H2O/7% D2O506.5ambient298
23D HNCACB20 mM sodium phosphate-6, 50 mM sodium chloride-7, 0.1 % sodium azide-8, 1 mM AEBSF protease inhibitor-9, 1 mM [U-99% 13C; U-99% 15N] Rv0603-SSD-1093% H2O/7% D2O506.5ambient298
33D CBCA(CO)NH20 mM sodium phosphate-6, 50 mM sodium chloride-7, 0.1 % sodium azide-8, 1 mM AEBSF protease inhibitor-9, 1 mM [U-99% 13C; U-99% 15N] Rv0603-SSD-1093% H2O/7% D2O506.5ambient298
43D HNCO20 mM sodium phosphate-6, 50 mM sodium chloride-7, 0.1 % sodium azide-8, 1 mM AEBSF protease inhibitor-9, 1 mM [U-99% 13C; U-99% 15N] Rv0603-SSD-1093% H2O/7% D2O506.5ambient298
53D HN(CO)CA20 mM sodium phosphate-6, 50 mM sodium chloride-7, 0.1 % sodium azide-8, 1 mM AEBSF protease inhibitor-9, 1 mM [U-99% 13C; U-99% 15N] Rv0603-SSD-1093% H2O/7% D2O506.5ambient298
63D H(CCO)NH20 mM sodium phosphate-6, 50 mM sodium chloride-7, 0.1 % sodium azide-8, 1 mM AEBSF protease inhibitor-9, 1 mM [U-99% 13C; U-99% 15N] Rv0603-SSD-1093% H2O/7% D2O506.5ambient298
73D C(CO)NH20 mM sodium phosphate-6, 50 mM sodium chloride-7, 0.1 % sodium azide-8, 1 mM AEBSF protease inhibitor-9, 1 mM [U-99% 13C; U-99% 15N] Rv0603-SSD-1093% H2O/7% D2O506.5ambient298
83D HCCH-TOCSY20 mM sodium phosphate-6, 50 mM sodium chloride-7, 0.1 % sodium azide-8, 1 mM AEBSF protease inhibitor-9, 1 mM [U-99% 13C; U-99% 15N] Rv0603-SSD-1093% H2O/7% D2O506.5ambient298
92D 1H-13C HSQC aliphatic20 mM sodium phosphate-11, 50 mM sodium chloride-12, 0.1 % sodium azide-13, 1 mM AEBSF protease inhibitor-14, 1 mM [U-99% 13C; U-99% 15N] Rv0603-SSD-15100% D2O506.5ambient298
102D 1H-13C HSQC aromatic20 mM sodium phosphate-11, 50 mM sodium chloride-12, 0.1 % sodium azide-13, 1 mM AEBSF protease inhibitor-14, 1 mM [U-99% 13C; U-99% 15N] Rv0603-SSD-15100% D2O506.5ambient298
112D CB(CGCD)HD20 mM sodium phosphate-6, 50 mM sodium chloride-7, 0.1 % sodium azide-8, 1 mM AEBSF protease inhibitor-9, 1 mM [U-99% 13C; U-99% 15N] Rv0603-SSD-1093% H2O/7% D2O506.5ambient298
122D CB(CGCE)HE20 mM sodium phosphate-6, 50 mM sodium chloride-7, 0.1 % sodium azide-8, 1 mM AEBSF protease inhibitor-9, 1 mM [U-99% 13C; U-99% 15N] Rv0603-SSD-1093% H2O/7% D2O506.5ambient298
132D 1H-1H NOESY aromatic20 mM sodium phosphate-6, 50 mM sodium chloride-7, 0.1 % sodium azide-8, 1 mM AEBSF protease inhibitor-9, 1 mM [U-99% 13C; U-99% 15N] Rv0603-SSD-1093% H2O/7% D2O506.5ambient298
143D 1H-15N NOESY20 mM sodium phosphate-1, 50 mM sodium chloride-2, 0.1 % sodium azide-3, 1 mM AEBSF protease inhibitor-4, 1 mM [U-99% 15N] Rv0603-SSD-593% H2O/7% D2O506.5ambient298
153D 1H-13C NOESY aliphatic20 mM sodium phosphate-11, 50 mM sodium chloride-12, 0.1 % sodium azide-13, 1 mM AEBSF protease inhibitor-14, 1 mM [U-99% 13C; U-99% 15N] Rv0603-SSD-15100% D2O506.5ambient298
163D 1H-13C NOESY aromatic20 mM sodium phosphate-11, 50 mM sodium chloride-12, 0.1 % sodium azide-13, 1 mM AEBSF protease inhibitor-14, 1 mM [U-99% 13C; U-99% 15N] Rv0603-SSD-15100% D2O506.5ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
NMR Refinement
MethodDetailsSoftware
water refinementCyana3.0
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionCyana3.0Guntert, Mumenthaler and Wuthrich
2validation of structure qualityPSVS1.4Bhattacharya and Montelione
3refinementCNSsolve_1.21