SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.8 mM [U-100% 13C; U-100% 15N] Hox-C9-1, 1.0 mM Geminin-2, 25 mM potassium phosphate-3, 100 mM sodium chloride-4, 5 mM DTT-590% H2O/10% D2O0.1256.5ambient296
22D 1H-15N HSQC1.0 mM Hox-C9-6, 0.8 mM [U-100% 13C; U-100% 15N] Geminin-7, 25 mM potassium phosphate-8, 100 mM sodium chloride-9, 5 mM DTT-1090% H2O/10% D2O0.1256.5ambient296
32D 1H-13C HSQC0.8 mM [U-100% 13C; U-100% 15N] Hox-C9-1, 1.0 mM Geminin-2, 25 mM potassium phosphate-3, 100 mM sodium chloride-4, 5 mM DTT-590% H2O/10% D2O0.1256.5ambient296
42D 1H-13C HSQC1.0 mM Hox-C9-6, 0.8 mM [U-100% 13C; U-100% 15N] Geminin-7, 25 mM potassium phosphate-8, 100 mM sodium chloride-9, 5 mM DTT-1090% H2O/10% D2O0.1256.5ambient296
53D HNCO0.8 mM [U-100% 13C; U-100% 15N] Hox-C9-1, 1.0 mM Geminin-2, 25 mM potassium phosphate-3, 100 mM sodium chloride-4, 5 mM DTT-590% H2O/10% D2O0.1256.5ambient296
63D HNCACB0.8 mM [U-100% 13C; U-100% 15N] Hox-C9-1, 1.0 mM Geminin-2, 25 mM potassium phosphate-3, 100 mM sodium chloride-4, 5 mM DTT-590% H2O/10% D2O0.1256.5ambient296
73D CBCA(CO)NH0.8 mM [U-100% 13C; U-100% 15N] Hox-C9-1, 1.0 mM Geminin-2, 25 mM potassium phosphate-3, 100 mM sodium chloride-4, 5 mM DTT-590% H2O/10% D2O0.1256.5ambient296
83D HCCH-TOCSY0.8 mM [U-100% 13C; U-100% 15N] Hox-C9-11, 1.0 mM Geminin-12, 25 mM potassium phosphate-13, 100 mM sodium chloride-14, 5 mM DTT-15100% D2O0.1256.5ambient296
93D 1H-15N NOESY0.8 mM [U-100% 13C; U-100% 15N] Hox-C9-1, 1.0 mM Geminin-2, 25 mM potassium phosphate-3, 100 mM sodium chloride-4, 5 mM DTT-590% H2O/10% D2O0.1256.5ambient296
103D 1H-13C NOESY aliphatic0.8 mM [U-100% 13C; U-100% 15N] Hox-C9-11, 1.0 mM Geminin-12, 25 mM potassium phosphate-13, 100 mM sodium chloride-14, 5 mM DTT-15100% D2O0.1256.5ambient296
113D HNCO1.0 mM Hox-C9-6, 0.8 mM [U-100% 13C; U-100% 15N] Geminin-7, 25 mM potassium phosphate-8, 100 mM sodium chloride-9, 5 mM DTT-1090% H2O/10% D2O0.1256.5ambient296
123D CBCA(CO)NH1.0 mM Hox-C9-6, 0.8 mM [U-100% 13C; U-100% 15N] Geminin-7, 25 mM potassium phosphate-8, 100 mM sodium chloride-9, 5 mM DTT-1090% H2O/10% D2O0.1256.5ambient296
133D HNCACB1.0 mM Hox-C9-6, 0.8 mM [U-100% 13C; U-100% 15N] Geminin-7, 25 mM potassium phosphate-8, 100 mM sodium chloride-9, 5 mM DTT-1090% H2O/10% D2O0.1256.5ambient296
143D 1H-15N NOESY1.0 mM Hox-C9-6, 0.8 mM [U-100% 13C; U-100% 15N] Geminin-7, 25 mM potassium phosphate-8, 100 mM sodium chloride-9, 5 mM DTT-1090% H2O/10% D2O0.1256.5ambient296
153D 1H-13C NOESY aliphatic1.0 mM Hox-C9-16, 0.8 mM [U-100% 13C; U-100% 15N] Geminin-17, 25 mM potassium phosphate-18, 100 mM sodium chloride-19, 5 mM DTT-20100% D2O0.1256.5ambient296
163D HCCH-TOCSY1.0 mM Hox-C9-16, 0.8 mM [U-100% 13C; U-100% 15N] Geminin-17, 25 mM potassium phosphate-18, 100 mM sodium chloride-19, 5 mM DTT-20100% D2O0.1256.5ambient296
173D 13C-FILTERED 13C-EDITED NOESY0.8 mM [U-100% 13C; U-100% 15N] Hox-C9-11, 1.0 mM Geminin-12, 25 mM potassium phosphate-13, 100 mM sodium chloride-14, 5 mM DTT-15100% D2O0.1256.5ambient296
183D 13C-FILTERED 13C-EDITED NOESY1.0 mM Hox-C9-16, 0.8 mM [U-100% 13C; U-100% 15N] Geminin-17, 25 mM potassium phosphate-18, 100 mM sodium chloride-19, 5 mM DTT-20100% D2O0.1256.5ambient296
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA500
2VarianINOVA750
NMR Refinement
MethodDetailsSoftware
torsion angle dynamics, simulated annealing, molecular dynamicsVnmrJ
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number200
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionVnmrJVarian
2processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3peak pickingSparkyGoddard
4chemical shift assignmentSparkyGoddard
5data analysisSparkyGoddard
6structure solutionCYANAGuntert, Mumenthaler and Wuthrich
7data analysisCYANAGuntert, Mumenthaler and Wuthrich
8data analysisProcheckNMRLaskowski and MacArthur
9geometry optimizationProcheckNMRLaskowski and MacArthur
10refinementCNSBrunger, Adams, Clore, Gros, Nilges and Read
11geometry optimizationCNSBrunger, Adams, Clore, Gros, Nilges and Read
12refinementHADDOCKAlexandre Bonvin
13refinementCYANA