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Solution Structure of a Nonphosphorylated Peptide Recognizing Domain
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.6mM [U-99% 13C; U-99% 15N] Protein Domain; 150mM sodium chloride; 20mM sodium phosphate; 2mM EDTA; 50mM Arginine; 50mM glutamine; 90% H2O/10% D2O 90% H2O/10% D2O 150 6.8 ambient 293 2 3D CBCA(CO)NH 0.6mM [U-99% 13C; U-99% 15N] Protein Domain; 150mM sodium chloride; 20mM sodium phosphate; 2mM EDTA; 50mM Arginine; 50mM glutamine; 90% H2O/10% D2O 90% H2O/10% D2O 150 6.8 ambient 293 3 3D HNCACB 0.6mM [U-99% 13C; U-99% 15N] Protein Domain; 150mM sodium chloride; 20mM sodium phosphate; 2mM EDTA; 50mM Arginine; 50mM glutamine; 90% H2O/10% D2O 90% H2O/10% D2O 150 6.8 ambient 293 4 3D C(CO)NH 0.6mM [U-99% 13C; U-99% 15N] Protein Domain; 150mM sodium chloride; 20mM sodium phosphate; 2mM EDTA; 50mM Arginine; 50mM glutamine; 90% H2O/10% D2O 90% H2O/10% D2O 150 6.8 ambient 293 5 3D HBHA(CO)NH 0.6mM [U-99% 13C; U-99% 15N] Protein Domain; 150mM sodium chloride; 20mM sodium phosphate; 2mM EDTA; 50mM Arginine; 50mM glutamine; 90% H2O/10% D2O 90% H2O/10% D2O 150 6.8 ambient 293 6 3D H(CCO)NH 0.6mM [U-99% 13C; U-99% 15N] Protein Domain; 150mM sodium chloride; 20mM sodium phosphate; 2mM EDTA; 50mM Arginine; 50mM glutamine; 90% H2O/10% D2O 90% H2O/10% D2O 150 6.8 ambient 293 7 3D HN(CO)CA 0.6mM [U-99% 13C; U-99% 15N] Protein Domain; 150mM sodium chloride; 20mM sodium phosphate; 2mM EDTA; 50mM Arginine; 50mM glutamine; 90% H2O/10% D2O 90% H2O/10% D2O 150 6.8 ambient 293 8 3D 1H-15N NOESY 0.6mM [U-99% 13C; U-99% 15N] Protein Domain; 150mM sodium chloride; 20mM sodium phosphate; 2mM EDTA; 50mM Arginine; 50mM glutamine; 90% H2O/10% D2O 90% H2O/10% D2O 150 6.8 ambient 293 9 3D 1H-13C NOESY 0.6mM [U-99% 13C; U-99% 15N] Protein Domain; 150mM sodium chloride; 20mM sodium phosphate; 2mM EDTA; 50mM Arginine; 50mM glutamine; 90% H2O/10% D2O 90% H2O/10% D2O 150 6.8 ambient 293 10 3D HCCH-COSY 0.6mM [U-99% 13C; U-99% 15N] Protein Domain; 150mM sodium chloride; 20mM sodium phosphate; 2mM EDTA; 50mM Arginine; 50mM glutamine; 90% H2O/10% D2O 90% H2O/10% D2O 150 6.8 ambient 293
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker DMX 500
NMR Refinement Method Details Software DGSA-distance geometry simulated annealing NMRPipe
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 200 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 data analysis NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 2 structure solution NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 3 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 4 data analysis CYANA Guntert, Mumenthaler and Wuthrich 5 structure solution CYANA Guntert, Mumenthaler and Wuthrich 6 processing CYANA Guntert, Mumenthaler and Wuthrich 7 refinement CYANA Guntert, Mumenthaler and Wuthrich