☰ Navigation Tabs
Solution Structure of Human Plasminogen Kringle 3
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 1.0 mM [U-97% 15N] hPgn rK3-1 90% H2O/10% D2O 0 ambient 298 2 3D 1H-15N TOCSY 1.0 mM [U-97% 15N] hPgn rK3-1 90% H2O/10% D2O 0 ambient 298 3 3D 1H-15N NOESY 1.0 mM [U-97% 15N] hPgn rK3-1 90% H2O/10% D2O 0 ambient 298 4 3D HNHA 1.0 mM [U-97% 15N] hPgn rK3-1 90% H2O/10% D2O 0 ambient 298 5 3D HNHB 1.0 mM [U-97% 15N] hPgn rK3-1 90% H2O/10% D2O 0 ambient 298 6 2D 1H-1H COSY 1.0 mM [U-97% 15N] hPgn rK3-1 90% H2O/10% D2O 0 ambient 298 7 2D 1H-1H TOCSY 1.0 mM [U-97% 15N] hPgn rK3-1 90% H2O/10% D2O 0 ambient 298 8 2D 1H-1H NOESY 1.0 mM [U-97% 15N] hPgn rK3-1 90% H2O/10% D2O 0 ambient 298 9 2D 1H-15N HSQC 1.0 mM [U-97% 15N] hPgn rK3-1 90% H2O/10% D2O 0 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker DRX 500 2 Bruker DRX 600
NMR Refinement Method Details Software simulated annealing, molecular dynamics XwinNMR
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 50 Conformers Submitted Total Number 20 Representative Model 1 (closest to the average)
Additional NMR Experimental Information Details The structure was determined using data collected at pH* 5.7
Computation: NMR Software # Classification Version Software Name Author 1 collection XwinNMR 2.6 Bruker Biospin 2 processing Felix 98 Accelrys Software Inc. 3 peak picking CcpNMR 1.0 CCPN 4 chemical shift assignment CcpNMR 1.0 CCPN 5 data analysis CcpNMR 1.0 CCPN 6 structure solution ARIA 2.2 Linge, O'Donoghue and Nilges 7 refinement ARIA 2.2 Linge, O'Donoghue and Nilges