2KXL

Solution structure of a bacterial cyclic nucleotide-activated K+ channel binding domain in the unliganded state


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.5 mM [U-15N] MloK1 CNBD, 10 mM [U-99% 2H] TRIS, 100 mM sodium chloride, 0.02 % sodium azide, 5 % [U-100% 2H] D2O, 95 % H2O, 200 uM EDTA95% H2O/5% D2O7ambient298
22D 1H-13C HSQC0.5 mM [U-13C; U-15N] MloK1 CNBD, 10 mM [U-99% 2H] TRIS, 100 mM sodium chloride, 0.02 % sodium azide, 5 % [U-100% 2H] D2O, 95 % H2O, 200 uM EDTA95% H2O/5% D2O7ambient298
33D HNCACB0.5 mM [U-13C; U-15N] MloK1 CNBD, 10 mM [U-99% 2H] TRIS, 100 mM sodium chloride, 0.02 % sodium azide, 5 % [U-100% 2H] D2O, 95 % H2O, 200 uM EDTA95% H2O/5% D2O7ambient298
43D HNCO0.5 mM [U-13C; U-15N] MloK1 CNBD, 10 mM [U-99% 2H] TRIS, 100 mM sodium chloride, 0.02 % sodium azide, 5 % [U-100% 2H] D2O, 95 % H2O, 200 uM EDTA95% H2O/5% D2O7ambient298
53D HNHA0.5 mM [U-13C; U-15N] MloK1 CNBD, 10 mM [U-99% 2H] TRIS, 100 mM sodium chloride, 0.02 % sodium azide, 5 % [U-100% 2H] D2O, 95 % H2O, 200 uM EDTA95% H2O/5% D2O7ambient298
63D HCCH-TOCSY0.5 mM [U-13C; U-15N] MloK1 CNBD, 10 mM [U-99% 2H] TRIS, 100 mM sodium chloride, 0.02 % sodium azide, 5 % [U-100% 2H] D2O, 95 % H2O, 200 uM EDTA95% H2O/5% D2O7ambient298
73D HCCH-COSY0.5 mM [U-13C; U-15N] MloK1 CNBD, 10 mM [U-99% 2H] TRIS, 100 mM sodium chloride, 0.02 % sodium azide, 5 % [U-100% 2H] D2O, 95 % H2O, 200 uM EDTA95% H2O/5% D2O7ambient298
83D 1H-15N NOESY0.5 mM [U-15N] MloK1 CNBD, 10 mM [U-99% 2H] TRIS, 100 mM sodium chloride, 0.02 % sodium azide, 5 % [U-100% 2H] D2O, 95 % H2O, 200 uM EDTA95% H2O/5% D2O7ambient298
93D 1H-13C NOESY0.5 mM [U-13C; U-15N] MloK1 CNBD, 10 mM [U-99% 2H] TRIS, 100 mM sodium chloride, 0.02 % sodium azide, 5 % [U-100% 2H] D2O, 95 % H2O, 200 uM EDTA95% H2O/5% D2O7ambient298
102D 1H-1H NOESY0.5 mM [U-13C; U-15N] MloK1 CNBD, 10 mM [U-99% 2H] TRIS, 100 mM sodium chloride, 0.02 % sodium azide, 5 % [U-100% 2H] D2O, 95 % H2O, 200 uM EDTA95% H2O/5% D2O7ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerINOVA800
2BrukerINOVA600
NMR Refinement
MethodDetailsSoftware
torsion angle dynamics, simulated annealingVnmrJ
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number100
Conformers Submitted Total Number15
Representative Model1 (fewest violations)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionVnmrJVarian
2processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3peak pickingCARAKeller and Wuthrich
4chemical shift assignmentCARAKeller and Wuthrich
5data analysisCARAKeller and Wuthrich
6structure solutionCYANA1.1Guntert, Mumenthaler and Wuthrich
7refinementCYANA1.1Guntert, Mumenthaler and Wuthrich