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N-terminal domain of the DP1 subunit of an archaeal D-family DNA polymerase
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-1H NOESY 0.7-3.3mM sodium phosphate; 0.7-3.3mM [U-99% 15N] sodium phosphate; 0.7-3.3mM [U-99% 13C; U-99% 15N] sodium phosphate; 95% H2O/5% D2O 95% H2O/5% D2O 0.15 5.5 ambient 318 2 2D 1H-1H TOCSY 0.7-3.3mM sodium phosphate; 0.7-3.3mM [U-99% 15N] sodium phosphate; 0.7-3.3mM [U-99% 13C; U-99% 15N] sodium phosphate; 95% H2O/5% D2O 95% H2O/5% D2O 0.15 5.5 ambient 318 3 2D DQF-COSY 0.7-3.3mM sodium phosphate; 0.7-3.3mM [U-99% 15N] sodium phosphate; 0.7-3.3mM [U-99% 13C; U-99% 15N] sodium phosphate; 95% H2O/5% D2O 95% H2O/5% D2O 0.15 5.5 ambient 318 4 3D HNCACB 0.7-3.3mM sodium phosphate; 0.7-3.3mM [U-99% 15N] sodium phosphate; 0.7-3.3mM [U-99% 13C; U-99% 15N] sodium phosphate; 95% H2O/5% D2O 95% H2O/5% D2O 0.15 5.5 ambient 318 5 3D CBCA(CO)NH 0.7-3.3mM sodium phosphate; 0.7-3.3mM [U-99% 15N] sodium phosphate; 0.7-3.3mM [U-99% 13C; U-99% 15N] sodium phosphate; 95% H2O/5% D2O 95% H2O/5% D2O 0.15 5.5 ambient 318 6 3D HNCA 0.7-3.3mM sodium phosphate; 0.7-3.3mM [U-99% 15N] sodium phosphate; 0.7-3.3mM [U-99% 13C; U-99% 15N] sodium phosphate; 95% H2O/5% D2O 95% H2O/5% D2O 0.15 5.5 ambient 318 7 3D HN(CO)CA 0.7-3.3mM sodium phosphate; 0.7-3.3mM [U-99% 15N] sodium phosphate; 0.7-3.3mM [U-99% 13C; U-99% 15N] sodium phosphate; 95% H2O/5% D2O 95% H2O/5% D2O 0.15 5.5 ambient 318 8 3D HCCH-COSY 0.7-3.3mM sodium phosphate; 0.7-3.3mM [U-99% 15N] sodium phosphate; 0.7-3.3mM [U-99% 13C; U-99% 15N] sodium phosphate; 95% H2O/5% D2O 95% H2O/5% D2O 0.15 5.5 ambient 318 9 3D HCCH-TOCSY 0.7-3.3mM sodium phosphate; 0.7-3.3mM [U-99% 15N] sodium phosphate; 0.7-3.3mM [U-99% 13C; U-99% 15N] sodium phosphate; 95% H2O/5% D2O 95% H2O/5% D2O 0.15 5.5 ambient 318 10 3D 1H-15N NOESY 0.7-3.3mM sodium phosphate; 0.7-3.3mM [U-99% 15N] sodium phosphate; 0.7-3.3mM [U-99% 13C; U-99% 15N] sodium phosphate; 95% H2O/5% D2O 95% H2O/5% D2O 0.15 5.5 ambient 318 11 3D 1H-15N TOCSY 0.7-3.3mM sodium phosphate; 0.7-3.3mM [U-99% 15N] sodium phosphate; 0.7-3.3mM [U-99% 13C; U-99% 15N] sodium phosphate; 95% H2O/5% D2O 95% H2O/5% D2O 0.15 5.5 ambient 318 12 3D 1H-13C NOESY 0.7-3.3mM sodium phosphate; 0.7-3.3mM [U-99% 15N] sodium phosphate; 0.7-3.3mM [U-99% 13C; U-99% 15N] sodium phosphate; 95% H2O/5% D2O 95% H2O/5% D2O 0.15 5.5 ambient 318 13 3D HMQC-NOESY-HMQC 0.7-3.3mM sodium phosphate; 0.7-3.3mM [U-99% 15N] sodium phosphate; 0.7-3.3mM [U-99% 13C; U-99% 15N] sodium phosphate; 95% H2O/5% D2O 95% H2O/5% D2O 0.15 5.5 ambient 318 14 2D 1H-15N HSQC 0.7-3.3mM sodium phosphate; 0.7-3.3mM [U-99% 15N] sodium phosphate; 0.7-3.3mM [U-99% 13C; U-99% 15N] sodium phosphate; 95% H2O/5% D2O 95% H2O/5% D2O 0.15 5.5 ambient 318 15 2D 1H-15N HSQC 3.3mM [U-99% 15N] sodium phosphate; 100% D2O 100% D2O 0.15 5.5 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker DMX 750 2 Bruker DMX 500
NMR Refinement Method Details Software simulated annealing CNS
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 50 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 structure solution CNS 1.1 2 refinement CNS 1.1