2JVA

NMR solution structure of peptidyl-tRNA hydrolase domain protein from Pseudomonas syringae pv. tomato. Northeast Structural Genomics Consortium target PsR211

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	1.28 mM [U-100% 13C; U-100% 15N] Peptidyl-tRNA hydrolase domain protein	90% H2O/10% D2O	100	5.5	ambient	298
2	2D 1H-13C HSQC	1.28 mM [U-100% 13C; U-100% 15N] Peptidyl-tRNA hydrolase domain protein	90% H2O/10% D2O	100	5.5	ambient	298
3	4,3D GFT CABCACONHN	1.28 mM [U-100% 13C; U-100% 15N] Peptidyl-tRNA hydrolase domain protein	90% H2O/10% D2O	100	5.5	ambient	298
4	4,3D GFT HNNCABCA	1.28 mM [U-100% 13C; U-100% 15N] Peptidyl-tRNA hydrolase domain protein	90% H2O/10% D2O	100	5.5	ambient	298
5	4,3D GFT HCCH COSY	1.28 mM [U-100% 13C; U-100% 15N] Peptidyl-tRNA hydrolase domain protein	90% H2O/10% D2O	100	5.5	ambient	298
6	3D HCCH-COSY	1.28 mM [U-100% 13C; U-100% 15N] Peptidyl-tRNA hydrolase domain protein	90% H2O/10% D2O	100	5.5	ambient	298
7	4,3D GFT HABCABCONHN	1.28 mM [U-100% 13C; U-100% 15N] Peptidyl-tRNA hydrolase domain protein	90% H2O/10% D2O	100	5.5	ambient	298
8	3D sim NOESY	1.28 mM [U-100% 13C; U-100% 15N] Peptidyl-tRNA hydrolase domain protein	90% H2O/10% D2O	100	5.5	ambient	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Varian	INOVA	750

NMR Refinement
Method	Details	Software
simulated annealing		VnmrJ

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	VnmrJ		Varian
2	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3	data analysis	XEASY		Bartels et al.
4	data analysis	TALOS		Cornilescu, Delaglio and Bax
5	data analysis	DYANA		Guntert, Mumenthaler and Wuthrich
6	chemical shift assignment	CYANA		Guntert, Mumenthaler and Wuthrich
7	chemical shift assignment	AutoAssign		Zimmerman, Moseley, Kulikowski and Montelione
8	chemical shift assignment	AutoStructure		Huang, Tejero, Powers and Montelione
9	refinement	CNS		Brunger, Adams, Clore, Gros, Nilges and Read
10	data analysis	MOLMOL		Koradi, Billeter and Wuthrich

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.