2JV0

SET domain of RIZ1 tumor suppressor (PRDM2)


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D 1H-15N NOESY0.4-1 mM [U-99% 15N] entity_1, 20 mM potassium phosphate, 50 mM potassium chloride, 2.5 mM DTT, 0-2 mM EDTA, 0-4.5 mM S-adenosyl-L-homocysteine90% H2O/10% D2O0.0826.8ambient298
23D 1H-13C NOESY0.8 mM [U-99% 13C; U-99% 15N] entity_1, 20 mM potassium phosphate, 50 mM potassium chloride, 2.5 mM DTT, 0-2 mM EDTA, 0-4.5 mM S-adenosyl-L-homocysteine90% H2O/10% D2O0.0826.8ambient298
33D 1H-13C aromatic NOESY0.8 mM [U-99% 13C; U-99% 15N] entity_1, 20 mM potassium phosphate, 50 mM potassium chloride, 2.5 mM DTT, 0-2 mM EDTA, 0-4.5 mM S-adenosyl-L-homocysteine90% H2O/10% D2O0.0826.8ambient298
44D 15N,15N NOESY0.9 mM [U-99% 15N; 80% 2H] entity_1, 20 mM potassium phosphate, 50 mM potassium chloride, 2.5 mM DTT, 1-2 mM EDTA, 4.5 mM S-adenosyl-L-homocysteine90% H2O/10% D2O0.0826.8ambient298
53D CBCA(CO)NH0.5-1 mM [U-99% 13C; U-99% 15N; 80% 2H] entity_1, 20 mM potassium phosphate, 50 mM potassium chloride, 2.5 mM DTT, 1-2 mM EDTA, 0-4.5 mM S-adenosyl-L-homocysteine90% H2O/10% D2O0.0826.8ambient298
63D C(CO)NH0.5-1 mM [U-99% 13C; U-99% 15N; 80% 2H] entity_1, 20 mM potassium phosphate, 50 mM potassium chloride, 2.5 mM DTT, 1-2 mM EDTA, 0-4.5 mM S-adenosyl-L-homocysteine90% H2O/10% D2O0.0826.8ambient298
73D HNCACB0.5-1 mM [U-99% 13C; U-99% 15N; 80% 2H] entity_1, 20 mM potassium phosphate, 50 mM potassium chloride, 2.5 mM DTT, 1-2 mM EDTA, 0-4.5 mM S-adenosyl-L-homocysteine90% H2O/10% D2O0.0826.8ambient298
83D H(CCO)NH0.8 mM [U-99% 13C; U-99% 15N] entity_1, 20 mM potassium phosphate, 50 mM potassium chloride, 2.5 mM DTT, 0-2 mM EDTA, 0-4.5 mM S-adenosyl-L-homocysteine90% H2O/10% D2O0.0826.8ambient298
93D HCCH-TOCSY0.8 mM [U-99% 13C; U-99% 15N] entity_1, 20 mM potassium phosphate, 50 mM potassium chloride, 2.5 mM DTT, 0-2 mM EDTA, 0-4.5 mM S-adenosyl-L-homocysteine90% H2O/10% D2O0.0826.8ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
2VarianINOVA600
3VarianINOVA750
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsFelix
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number40
Conformers Submitted Total Number16
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1chemical shift assignmentFelixAccelrys Software Inc.
2data analysisFelixAccelrys Software Inc.
3processingFelixAccelrys Software Inc.
4structure solutionARIA1.2Linge, O'Donoghue and Nilges
5refinementX-PLOR NIH2.13Schwieters, Kuszewski, Tjandra and Clore