2JUG

Multienzyme Docking in Hybrid Megasynthetases


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D 1H-13C NOESY1 mM [U-100% 13C; U-100% 15N] TubCdd, 20 uM TSP, 0.1 % sodium azide, 50 mM sodium phosphate, 100 mM sodium chloride90% H2O/10% D2O0.156ambient308
23D 1H-15N NOESY1 mM [U-100% 13C; U-100% 15N] TubCdd, 20 uM TSP, 0.1 % sodium azide, 50 mM sodium phosphate, 100 mM sodium chloride90% H2O/10% D2O0.156ambient308
33D 13C-separated 12C-selected NOESY0.5 mM [U-100% 13C; U-100% 15N] TubCdd, 20 uM TSP, 0.1 % sodium azide, 50 mM sodium phosphate, 100 mM sodium chloride, 0.5 mM TubCdd90% H2O/10% D2O0.156ambient308
42D 1H-15N HSQC1 mM [U-100% 13C; U-100% 15N] TubCdd, 20 uM TSP, 0.1 % sodium azide, 50 mM sodium phosphate, 100 mM sodium chloride90% H2O/10% D2O0.156ambient308
52D 1H-13C HSQC1 mM [U-100% 13C; U-100% 15N] TubCdd, 20 uM TSP, 0.1 % sodium azide, 50 mM sodium phosphate, 100 mM sodium chloride90% H2O/10% D2O0.156ambient308
63D CBCA(CO)NH1 mM [U-100% 13C; U-100% 15N] TubCdd, 20 uM TSP, 0.1 % sodium azide, 50 mM sodium phosphate, 100 mM sodium chloride90% H2O/10% D2O0.156ambient308
73D HNCACB1 mM [U-100% 13C; U-100% 15N] TubCdd, 20 uM TSP, 0.1 % sodium azide, 50 mM sodium phosphate, 100 mM sodium chloride90% H2O/10% D2O0.156ambient308
83D HCCH-TOCSY1 mM [U-100% 13C; U-100% 15N] TubCdd, 20 uM TSP, 0.1 % sodium azide, 50 mM sodium phosphate, 100 mM sodium chloride90% H2O/10% D2O0.156ambient308
93D HBHA(CO)NH1 mM [U-100% 13C; U-100% 15N] TubCdd, 20 uM TSP, 0.1 % sodium azide, 50 mM sodium phosphate, 100 mM sodium chloride90% H2O/10% D2O0.156ambient308
103D HNCO1 mM [U-100% 13C; U-100% 15N] TubCdd, 20 uM TSP, 0.1 % sodium azide, 50 mM sodium phosphate, 100 mM sodium chloride90% H2O/10% D2O0.156ambient308
113D 1H-15N TOCSY1 mM [U-100% 13C; U-100% 15N] TubCdd, 20 uM TSP, 0.1 % sodium azide, 50 mM sodium phosphate, 100 mM sodium chloride90% H2O/10% D2O0.156ambient308
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX500
2BrukerDRX800
NMR Refinement
MethodDetailsSoftware
simulated annealingsimulated annealing using Aria 1.2ARIA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number50
Conformers Submitted Total Number10
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionARIA1.2Linge, O'Donoghue and Nilges
2processingAzaraBoucher
3chemical shift assignmentCcpNmr Analysis1.0.15Vranken, Boucher, Stevens, Fogh, Pajon, Llinas, Ulrich, Markley, Ionides and Laue
4peak pickingCcpNmr Analysis1.0.15Vranken, Boucher, Stevens, Fogh, Pajon, Llinas, Ulrich, Markley, Ionides and Laue
5data analysisCcpNmr Analysis1.0.15Vranken, Boucher, Stevens, Fogh, Pajon, Llinas, Ulrich, Markley, Ionides and Laue
6refinementARIA1.2Linge, O'Donoghue and Nilges