2JTO

Solution Structure of Tick Carboxypeptidase Inhibitor


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H NOESY0.76 mM [U-100% 15N] TCI95% H2O/5% D2O78.45.6ambient298
22D 1H-1H TOCSY0.76 mM [U-100% 15N] TCI95% H2O/5% D2O78.45.6ambient298
32D 1H-1H COSY0.76 mM [U-100% 15N] TCI95% H2O/5% D2O78.45.6ambient298
42D 1H-15N HSQC0.7 mM [U-100% 15N] TCI95% H2O/5% D2O78.45.6ambient298
53D 1H-15N NOESY0.7 mM [U-100% 15N] TCI95% H2O/5% D2O78.45.6ambient298
63D 1H-15N TOCSY0.7 mM [U-100% 15N] TCI95% H2O/5% D2O78.45.6ambient298
72D 1H-1H NOESY0.7 mM [U-100% 15N] TCI95% H2O/5% D2O78.45.6ambient298
82D 1H-1H TOCSY0.7 mM [U-100% 15N] TCI95% H2O/5% D2O78.45.6ambient298
92D 1H-15N HSQC0.7 mM [U-100% 15N] TCI95% H2O/5% D2O78.45.6ambient298
103D HNHA0.7 mM [U-100% 15N] TCI95% H2O/5% D2O78.45.6ambient298
113D HNHB0.7 mM [U-100% 15N] TCI95% H2O/5% D2O78.45.6ambient298
122D 1H-15N HSQC0.1 mM [U-100% 13C; U-100% 15N] TCI95% H2O/5% D2O78.45.6ambient298
132D 1H-13C HSQC0.1 mM [U-100% 13C; U-100% 15N] TCI95% H2O/5% D2O78.45.6ambient298
143D HNCO0.1 mM [U-100% 13C; U-100% 15N] TCI95% H2O/5% D2O78.45.6ambient298
153D CBCA(CO)NH0.1 mM [U-100% 13C; U-100% 15N] TCI95% H2O/5% D2O78.45.6ambient298
163D HNCACB0.1 mM [U-100% 13C; U-100% 15N] TCI95% H2O/5% D2O78.45.6ambient298
173D C(CO)NH0.1 mM [U-100% 13C; U-100% 15N] TCI95% H2O/5% D2O78.45.6ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
2BrukerAVANCE700
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsstucture calculation with torsion angel dynamics, the 20 conformers with the lowest final CYANA target were subjected to restrained energy minimization energy in vacuo with the program AMBER7XwinNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number20
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionXwinNMR3.5Bruker Biospin
2processingXwinNMR3.5Bruker Biospin
3processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4processingNMRDrawDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
5chemical shift calculationMARSJung adn Markus Zweckstetter
6chemical shift calculationGARANTBartels, Guntert, Billeter and Wuthrich
7data analysisNMRViewJohnson, One Moon Scientific
8peak pickingNMRViewJohnson, One Moon Scientific
9chemical shift assignmentNMRViewJohnson, One Moon Scientific
10data analysisTALOSCornilescu, Delaglio and Bax
11structure solutionCYANAGuntert, Mumenthaler and Wuthrich
12refinementAmberCase, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, and Koll
13data analysisProcheckNMRLaskowski and MacArthur
14data analysisVADARDS Wishart
15data analysisMOLMOLKoradi, Billeter and Wuthrich