2J1D

Crystallization of hDaam1 C-terminal Fragment


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
16.2pH 6.20
Crystal Properties
Matthews coefficientSolvent content
4.1970.42

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 100.897α = 90
b = 100.343β = 90
c = 148.397γ = 90
Symmetry
Space GroupI 2 2 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC CCD2006-02-12MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 24-ID-CAPS24-ID-C

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.5520980.076.14.4245462

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONOTHERTHROUGHOUT2.2519.832349915001000.220.2180.25RANDOM57.76
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-6.2611.9-5.63
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg40.353
r_dihedral_angle_3_deg18.891
r_dihedral_angle_4_deg13.428
r_dihedral_angle_1_deg6.215
r_scangle_it2.017
r_scbond_it1.398
r_angle_refined_deg1.307
r_angle_other_deg0.901
r_mcbond_it0.892
r_mcangle_it0.824
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg40.353
r_dihedral_angle_3_deg18.891
r_dihedral_angle_4_deg13.428
r_dihedral_angle_1_deg6.215
r_scangle_it2.017
r_scbond_it1.398
r_angle_refined_deg1.307
r_angle_other_deg0.901
r_mcbond_it0.892
r_mcangle_it0.824
r_symmetry_hbond_refined0.552
r_symmetry_vdw_refined0.209
r_symmetry_vdw_other0.205
r_nbd_refined0.197
r_xyhbond_nbd_refined0.189
r_nbd_other0.188
r_nbtor_refined0.174
r_nbtor_other0.089
r_chiral_restr0.074
r_mcbond_other0.057
r_bond_refined_d0.009
r_bond_other_d0.006
r_gen_planes_refined0.003
r_gen_planes_other0.001
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3202
Nucleic Acid Atoms
Solvent Atoms75
Heterogen Atoms11

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
XDSdata scaling